Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p24170 Brassica napus
Aa31LG5G430 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.1953 Anthoceros agrestis
Ah.05g176380 Amaranthus hybridus
AL6G52870 Arabidopsis lyrata
Aqoxy5G03955 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.6Z7PRK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CH4HI7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.F84KN2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FSVT9P Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.G2MMRU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SQV5XE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.W4LYDN Arachis hypogaea
AT4G00560 Arabidopsis thaliana
ATR0680G024 Amborella trichopoda
Atru.chr5.441 Acer truncatum
AUR62004310 Chenopodium quinoa
AUR62022761 Chenopodium quinoa
BcaB01g02194 Brassica carinata
BcaC03g16043 Brassica carinata
BcaNung07289 Brassica carinata
BolC2t09820H Brassica oleracea
BraA02t07408Z Brassica rapa
C02p38040 Brassica napus
CAN.G78.17 Capsicum annuum
CAN.G960.12 Capsicum annuum
CANSAT56G3547 Cannabis sativa
CARHR248730 Cardamine hirsuta
Carub.0006s3668 Capsella rubella
Ca_18844_v3 Cicer arietinum L.
Cc02_g37460 Coffea canephora
CDE09G0818 Ceratophyllum demersum
Ciclev10021196m.g Citrus clementina
CiPaw.01G056200 Carya illinoinensis
ClCG06G000030 Citrullus lanatus
COL.COLO4_12599 Corchorus olitorius
Cpa.g.sc704.3 Carica papaya
Cre17.g718250 Chlamydomonas reinhardtii
CsaV3_6G005760 Cucumis sativus L.
CSS0028869 Camellia sinensis var. sinensis
CSS0045846 Camellia sinensis var. sinensis
DCAR_006914 Daucus carota
Dinv43779 Davidia involucrata
Duzib138G1089 Durio zibethinus
ECA240G0419 Erigeron canadensis
EL10Ac1g00521 Beta vulgaris
Eucgr.E00187 Eucalyptus grandis
FAN01G1890 Fragaria x ananassa
FAN03G0731 Fragaria x ananassa
FAN06G0948 Fragaria x ananassa
FAN06G1647 Fragaria x ananassa
FAN10G1762 Fragaria x ananassa
FvH4_7g13560 Fragaria vesca
Glyma.03G015066 Glycine max
Glyma.03G015132 Glycine max
Glyma.07G075200 Glycine max
Gohir.A11G082100 Gossypium hirsutum
Gohir.D11G091000 Gossypium hirsutum
Gorai.007G097000 Gossypium raimondii
GSVIVG01026821001 Vitis vinifera
HanXRQChr03g0093511 Helianthus annuus
Haze_15198 Corylus avellana
HPP92_025722 Vanilla planifolia
Hund27309 Selenicereus undatus
Lalb_Chr04g0256681 Lupinus albus
Lj3g0013979 Lotus japonicus
Lj9A579T30 Lonicera japonica
Lsat_1_v5_gn_3_136741 Lactuca sativa
Manes.01G260300 Manihot esculenta
Mapoly0113s0013 Marchantia polymorpha
MBI18_g09781_MAGBIO Magnolia biondii
MBI18_g10614_MAGBIO Magnolia biondii
MCO04G198 Micromonas commoda
MD01G1052100 Malus domestica
MD01G1052200 Malus domestica
MD07G1128800 Malus domestica
Medtr8g032270 Medicago truncatula
MELO3C022535.2 Cucumis melo
Migut.N01426 Erythranthe guttata
Migut.O00555 Erythranthe guttata
MSTRG.28212 Avicennia marina
Nitab4.5_0001251g0070 Nicotiana tabacum
Nitab4.5_0006669g0040 Nicotiana tabacum
Nn6g33539 Nelumbo nucifera
Oeu014686.1 Olea europaea
Os02g0826200 Oryza sativa ssp. japonica
Peaxi162Scf00397g00521 Petunia axillaris
PGR042G0753 Punica granatum
PGSC0003DMG402000019 Solanum tuberosum
Phvul.010G093900 Phaseolus vulgaris
Potri.014G079700 Populus trichocarpa
Pp3c6_20490 Physcomitrium patens
Pp3s34_190 Physcomitrium patens
PRCOL_00000453 Prasinoderma coloniale
PRCOL_00003005 Prasinoderma coloniale
Prupe.2G159800 Prunus persica
Psat4g153000 Pisum sativum
Psat4g153040 Pisum sativum
PSO478G0627 Papaver somniferum
PSO782G1310 Papaver somniferum
QL02p088470 Quercus lobata
QL02p088489 Quercus lobata
QL03p011361 Quercus lobata
QL07p038896 Quercus lobata
QL08p049836 Quercus lobata
RcHm_v2.0_Chr0c39g0503211 Rosa chinensis
RcHm_v2.0_Chr0c39g0503281 Rosa chinensis
RcHm_v2.0_Chr0c39g0503291 Rosa chinensis
RcHm_v2.0_Chr0c39g0503341 Rosa chinensis
RcHm_v2.0_Chr1g0353111 Rosa chinensis
RcHm_v2.0_Chr1g0353131 Rosa chinensis
RcHm_v2.0_Chr1g0353141 Rosa chinensis
RcHm_v2.0_Chr1g0353211 Rosa chinensis
RcHm_v2.0_Chr1g0353241 Rosa chinensis
RcHm_v2.0_Chr1g0353281 Rosa chinensis
RcHm_v2.0_Chr1g0353321 Rosa chinensis
RcHm_v2.0_Chr1g0353331 Rosa chinensis
RcHm_v2.0_Chr3g0477641 Rosa chinensis
Rhsim07G0018900 Rhododendron simsii
Sabra14G0057900 Salix brachista
SalBow5G2488 Salvia bowleyana
SalBow5G4657 Salvia bowleyana
Sc23g0003120 Simmondsia chinensis
Sed0022570 Sechium edule
SEGI_02313 Sequoiadendron giganteum
SEGI_30707 Sequoiadendron giganteum
SGA_v2.0_scaffold43G16446 Striga asiatica
SMO137G0161 Selaginella moellendorffii
Solyc01g094190.3 Solanum lycopersicum
Sopen01g037990 Solanum pennellii
Sp6g00600 Schrenkiella parvula
TAR374G0257 Trochodendron aralioides
THA.LOC104801453 Tarenaya hassleriana
Thecc.01G365300 Theobroma cacao
Thhalv10028798m.g Eutrema salsugineum
Thhalv10029327m.g Eutrema salsugineum
TPR.G9802 Trifolium pratense
TWI59G1218 Tripterygium wilfordii
unitig_0.g1508 Utricularia gibba
vmacro13319 Vaccinium macrocarpon
VMungo0331G0206 Vigna mungo
Zm00001eb259270 Zea mays

User provided reference genes

Program Settings