Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p25050 Brassica napus
A04p01540 Brassica napus
A09p52830 Brassica napus
Aa31LG10G14910 Aethionema arabicum
Aa31LG1G26700 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.5763 Anthoceros agrestis
Actinidia12186 Actinidia chinensis
Actinidia22760 Actinidia chinensis
Actinidia22761 Actinidia chinensis
Actinidia22816 Actinidia chinensis
Actinidia31424 Actinidia chinensis
Actinidia33267 Actinidia chinensis
Ah.04g166190 Amaranthus hybridus
AL4G44260 Arabidopsis lyrata
Aqoxy7G00752 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.6F7D9A Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UJ6N0S Arachis hypogaea
AT2G45150 Arabidopsis thaliana
AT3G60620 Arabidopsis thaliana
ATR0807G181 Amborella trichopoda
Atru.chr5.253 Acer truncatum
AUR62034758 Chenopodium quinoa
AUR62044468 Chenopodium quinoa
BcaB01g03288 Brassica carinata
BcaC01g05155 Brassica carinata
BcaC07g40582 Brassica carinata
BolC3t15336H Brassica oleracea
BolC8t51147H Brassica oleracea
BraA03t11707Z Brassica rapa
BraA04t15874Z Brassica rapa
BraA09t40715Z Brassica rapa
C03p29890 Brassica napus
C08p35570 Brassica napus
CAN.G1469.16 Capsicum annuum
CANSAT56G1088 Cannabis sativa
CANSAT56G2474 Cannabis sativa
CARHR171010 Cardamine hirsuta
Carub.0004s2776 Capsella rubella
Carub.0005s2735 Capsella rubella
Ca_15027_v3 Cicer arietinum L.
CBR_g3184 Chara braunii
CBR_g46453 Chara braunii
Cc02_g24400 Coffea canephora
CDE04G3112 Ceratophyllum demersum
Cfa011170 Carpinus fangiana
Ciclev10020384m.g Citrus clementina
CiPaw.14G025800 Carya illinoinensis
ClCG06G003040 Citrullus lanatus
COL.COLO4_12491 Corchorus olitorius
Cpa.g.c30654 Carica papaya
Cpa.g.sc49.156 Carica papaya
Cre12.g489050 Chlamydomonas reinhardtii
CsaV3_6G009150 Cucumis sativus L.
CSS0025552 Camellia sinensis var. sinensis
CSS0046286 Camellia sinensis var. sinensis
DCAR_015887 Daucus carota
Dinv43674 Davidia involucrata
Dinv44120 Davidia involucrata
Duzib133G0265 Durio zibethinus
Duzib138G0318 Durio zibethinus
ECA236G1715 Erigeron canadensis
ECA236G3830 Erigeron canadensis
EL10Ac4g07683 Beta vulgaris
Eucgr.E01511 Eucalyptus grandis
FAN01G1917 Fragaria x ananassa
FAN03G0115 Fragaria x ananassa
FAN06G0681 Fragaria x ananassa
FAN06G1173 Fragaria x ananassa
FAN10G0345 Fragaria x ananassa
FAN10G0671 Fragaria x ananassa
FvH4_7g11110 Fragaria vesca
Glyma.11G161400 Glycine max
Glyma.18G055100 Glycine max
Gohir.A07G146900 Gossypium hirsutum
Gohir.D07G152900 Gossypium hirsutum
Gorai.001G175000 Gossypium raimondii
GSVIVG01027681001 Vitis vinifera
HanXRQChr04g0123141 Helianthus annuus
HanXRQChr06g0169081 Helianthus annuus
Haze_02679 Corylus avellana
Hma1.2p1_0072F.1_g038340 Hydrangea macrophylla
HPP92_022438 Vanilla planifolia
Hund22462 Selenicereus undatus
Lalb_Chr20g0117361 Lupinus albus
Lj6g0011922 Lotus japonicus
Lj7A535G33 Lonicera japonica
Lsat_1_v5_gn_7_9240 Lactuca sativa
Manes.01G269000 Manihot esculenta
Mapoly0037s0028 Marchantia polymorpha
MBI04_g41908_MAGBIO Magnolia biondii
MBI04_g41909_MAGBIO Magnolia biondii
MCO03G003 Micromonas commoda
MD02G1210300 Malus domestica
MD07G1115700 Malus domestica
Medtr3g466380 Medicago truncatula
MELO3C021145.2 Cucumis melo
Migut.B01596 Erythranthe guttata
MSTRG.20729 Avicennia marina
Nitab4.5_0000859g0250 Nicotiana tabacum
Nitab4.5_0012722g0010 Nicotiana tabacum
Nn1g01045 Nelumbo nucifera
Nn6g33989 Nelumbo nucifera
Oeu005823.1 Olea europaea
Peaxi162Scf00803g00018 Petunia axillaris
PGR142G4306 Punica granatum
PGSC0003DMG400026014 Solanum tuberosum
Phvul.006G076100 Phaseolus vulgaris
Potri.014G060100 Populus trichocarpa
Pp3c5_19250 Physcomitrium patens
Pp3c6_11200 Physcomitrium patens
PRCOL_00006057 Prasinoderma coloniale
Prupe.2G138300 Prunus persica
Psat5g150560 Pisum sativum
PSO210G1941 Papaver somniferum
QL04p038735 Quercus lobata
RcHm_v2.0_Chr1g0349131 Rosa chinensis
Rhsim05G0103000 Rhododendron simsii
Rhsim07G0031000 Rhododendron simsii
Sabra14G0044000 Salix brachista
SalBow5G1302 Salvia bowleyana
Sc24g0004030 Simmondsia chinensis
Sed0016036 Sechium edule
SEGI_35106 Sequoiadendron giganteum
SGA_v2.0_scaffold153G36970 Striga asiatica
SMO118G0360 Selaginella moellendorffii
Solyc01g090940.3 Solanum lycopersicum
Sopen01g036670 Solanum pennellii
Sp4g27210 Schrenkiella parvula
Sp5g02620 Schrenkiella parvula
TAR375G0089 Trochodendron aralioides
THA.LOC104817220 Tarenaya hassleriana
Thecc.01G382500 Theobroma cacao
Thhalv10001472m.g Eutrema salsugineum
Thhalv10006014m.g Eutrema salsugineum
TPR.G24981 Trifolium pratense
TWI23G1139 Tripterygium wilfordii
unitig_31.g34043 Utricularia gibba
unitig_8.g3829 Utricularia gibba
vmacro13440 Vaccinium macrocarpon
VMungo0540G2212 Vigna mungo
Zm00001eb208740 Zea mays
Zm00001eb230950 Zea mays

User provided reference genes

Program Settings