Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p21620 Brassica napus
A09p46440 Brassica napus
Aa31LG6G14810 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.532 Anthoceros agrestis
Actinidia11927 Actinidia chinensis
Actinidia36381 Actinidia chinensis
Actinidia36382 Actinidia chinensis
Ah.02g129230 Amaranthus hybridus
AL5G34360 Arabidopsis lyrata
Aqoxy5G02272 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.072AWD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.BDDW1F Arachis hypogaea
AT3G53440 Arabidopsis thaliana
ATR0807G165 Amborella trichopoda
Atru.chr3.1145 Acer truncatum
Atru.chr3.1164 Acer truncatum
AUR62002656 Chenopodium quinoa
AUR62042837 Chenopodium quinoa
AUR62044121 Chenopodium quinoa
AUR62044448 Chenopodium quinoa
BcaB01g00273 Brassica carinata
BcaB01g00278 Brassica carinata
BolC6t37311H Brassica oleracea
BolC8t50481H Brassica oleracea
BraA07t29844Z Brassica rapa
BraA09t40109Z Brassica rapa
C06p21260 Brassica napus
C08p28800 Brassica napus
CAN.G179.11 Capsicum annuum
CANSAT11G0958 Cannabis sativa
CARHR163340 Cardamine hirsuta
Carub.0005s2001 Capsella rubella
Ca_16796_v3 Cicer arietinum L.
Ca_25206_v3 Cicer arietinum L.
Cc07_g07800 Coffea canephora
CDE01G0382 Ceratophyllum demersum
Cfa006826 Carpinus fangiana
Ciclev10026033m.g Citrus clementina
CiPaw.07G042000 Carya illinoinensis
ClCG01G018150 Citrullus lanatus
Cpa.g.sc129.20 Carica papaya
Cre14.g624600 Chlamydomonas reinhardtii
CsaV3_6G044720 Cucumis sativus L.
CSS0004865 Camellia sinensis var. sinensis
CSS0043740 Camellia sinensis var. sinensis
CSS0048225 Camellia sinensis var. sinensis
DCAR_025850 Daucus carota
DCAR_025854 Daucus carota
Dinv26998 Davidia involucrata
Dinv36981 Davidia involucrata
Dinv39648 Davidia involucrata
Duzib147G0396 Durio zibethinus
Duzib264G0018 Durio zibethinus
ECA232G1574 Erigeron canadensis
ECA238G4016 Erigeron canadensis
EL10Ac6g13300 Beta vulgaris
FAN19G2338 Fragaria x ananassa
FAN23G1375 Fragaria x ananassa
FAN26G3170 Fragaria x ananassa
FAN28G0408 Fragaria x ananassa
FvH4_1g18920 Fragaria vesca
Glyma.01G019600 Glycine max
Glyma.09G203100 Glycine max
Gohir.A02G146400 Gossypium hirsutum
Gohir.A11G049800 Gossypium hirsutum
Gohir.D03G034100 Gossypium hirsutum
Gohir.D11G053300 Gossypium hirsutum
Gorai.003G035800 Gossypium raimondii
Gorai.007G058000 Gossypium raimondii
GSVIVG01008306001 Vitis vinifera
HanXRQChr12g0355811 Helianthus annuus
Haze_03937 Corylus avellana
Hma1.2p1_0080F.1_g042150 Hydrangea macrophylla
HPP92_000395 Vanilla planifolia
Hund25262 Selenicereus undatus
Lalb_Chr05g0216181 Lupinus albus
Lj2g0022469 Lotus japonicus
Lj5A206G51 Lonicera japonica
Lsat_1_v5_gn_2_82180 Lactuca sativa
Manes.12G121000 Manihot esculenta
Manes.13G104500 Manihot esculenta
Mapoly0062s0031 Marchantia polymorpha
MBI16_g26241_MAGBIO Magnolia biondii
MBI16_g31813_MAGBIO Magnolia biondii
MD01G1045600 Malus domestica
MD15G1306300 Malus domestica
Medtr5g030750 Medicago truncatula
Medtr7g076850 Medicago truncatula
MELO3C007693.2 Cucumis melo
Migut.F01569 Erythranthe guttata
MSTRG.8297 Avicennia marina
Nitab4.5_0001888g0010 Nicotiana tabacum
Nitab4.5_0002103g0070 Nicotiana tabacum
Nitab4.5_0008618g0020 Nicotiana tabacum
Nn4g23001 Nelumbo nucifera
Nn5g29007 Nelumbo nucifera
Oeu030825.1 Olea europaea
Oeu050977.1 Olea europaea
Os01g0581900 Oryza sativa ssp. japonica
Peaxi162Scf00309g00413 Petunia axillaris
PGR031G1473 Punica granatum
Phvul.002G142700 Phaseolus vulgaris
Phvul.010G030900 Phaseolus vulgaris
Potri.006G280800 Populus trichocarpa
Potri.018G000700 Populus trichocarpa
Prupe.6G210300 Prunus persica
Psat2g117680 Pisum sativum
Psat2g134960 Pisum sativum
Psat5g132240 Pisum sativum
PSO210G4083 Papaver somniferum
PSO761G0065 Papaver somniferum
QL06p037497 Quercus lobata
RcHm_v2.0_Chr2g0109931 Rosa chinensis
Rhsim07G0215300 Rhododendron simsii
Rhsim10G0081400 Rhododendron simsii
Sabra18G0005500 Salix brachista
SalBow6G3962 Salvia bowleyana
Sc22g0002020 Simmondsia chinensis
Sed0015871 Sechium edule
SEGI_16708 Sequoiadendron giganteum
SEGI_41064 Sequoiadendron giganteum
SGA_v2.0_scaffold76G25043 Striga asiatica
SHI12143 Sapria himalayana
Solyc01g068540.3 Solanum lycopersicum
Sopen01g030500 Solanum pennellii
Sp5g08900 Schrenkiella parvula
TAR381G1522 Trochodendron aralioides
TAR625G0743 Trochodendron aralioides
THA.LOC104807095 Tarenaya hassleriana
THA.LOC104807657 Tarenaya hassleriana
Thecc.01G083200 Theobroma cacao
Thhalv10010289m.g Eutrema salsugineum
TPR.G30490 Trifolium pratense
TWI74G0553 Tripterygium wilfordii
TWI77G0556 Tripterygium wilfordii
unitig_62.g23938 Utricularia gibba
vmacro05480 Vaccinium macrocarpon
vmacro11204 Vaccinium macrocarpon
VMungo1215G2194 Vigna mungo
Zm00001eb297530 Zea mays
Zm00001eb345110 Zea mays
Zm00001eb345140 Zea mays

User provided reference genes

Program Settings