Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p22980 Brassica napus
A05p01930 Brassica napus
Aa31LG3G1260 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.1228 Anthoceros agrestis
Actinidia37854 Actinidia chinensis
Ah.04g150540 Amaranthus hybridus
AL4G38790 Arabidopsis lyrata
Aqoxy1G00050 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.HZCB2X Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PFNU0X Arachis hypogaea
AT2G40840 Arabidopsis thaliana
ATR0782G050 Amborella trichopoda
Atru.chr1.1378 Acer truncatum
AUR62018414 Chenopodium quinoa
AUR62021029 Chenopodium quinoa
BcaB06g29184 Brassica carinata
BcaC02g12738 Brassica carinata
BcaC06g33443 Brassica carinata
BolC4t21874H Brassica oleracea
BolC7t45271H Brassica oleracea
BraA03t11521Z Brassica rapa
BraA05t19191Z Brassica rapa
C04p02280 Brassica napus
C07p47440 Brassica napus
CAN.G39.12 Capsicum annuum
CAN.G39.13 Capsicum annuum
CAN.G39.14 Capsicum annuum
CANSAT64G0498 Cannabis sativa
CARHR135960 Cardamine hirsuta
Carub.0004s2316 Capsella rubella
Ca_08698_v3 Cicer arietinum L.
CBR_g6687 Chara braunii
Cc06_g21270 Coffea canephora
Cc06_g21280 Coffea canephora
CDE08G1108 Ceratophyllum demersum
CDE09G0019 Ceratophyllum demersum
Cfa019951 Carpinus fangiana
Ciclev10010989m.g Citrus clementina
CiPaw.09G051900 Carya illinoinensis
ClCG04G005890 Citrullus lanatus
COL.COLO4_33519 Corchorus olitorius
COL.COLO4_33521 Corchorus olitorius
Cpa.g.sc92.60 Carica papaya
Cre02.g095126 Chlamydomonas reinhardtii
CsaV3_4G029230 Cucumis sativus L.
CSS0014915 Camellia sinensis var. sinensis
DCAR_013530 Daucus carota
Dinv26400 Davidia involucrata
Duzib128G1115 Durio zibethinus
ECA236G3220 Erigeron canadensis
EL10Ac3g07301 Beta vulgaris
EL10Ac5g11635 Beta vulgaris
Eucgr.K01679 Eucalyptus grandis
FAN06G1462 Fragaria x ananassa
FAN19G2285 Fragaria x ananassa
FAN23G1756 Fragaria x ananassa
FAN26G2899 Fragaria x ananassa
FAN28G1591 Fragaria x ananassa
FvH4_1g29260 Fragaria vesca
Glyma.03G121100 Glycine max
Glyma.19G125800 Glycine max
Gohir.A06G109000 Gossypium hirsutum
Gohir.D06G113100 Gossypium hirsutum
Gorai.010G128900 Gossypium raimondii
GSVIVG01025810001 Vitis vinifera
HanXRQChr06g0177301 Helianthus annuus
Haze_20288 Corylus avellana
Hma1.2p1_1135F.1_g260440 Hydrangea macrophylla
HPP92_014255 Vanilla planifolia
Hund19067 Selenicereus undatus
Hund24536 Selenicereus undatus
Lalb_Chr14g0365451 Lupinus albus
Lj1g0025305 Lotus japonicus
Lj2A411T33 Lonicera japonica
Lsat_1_v5_gn_8_83900 Lactuca sativa
Manes.08G162200 Manihot esculenta
Mapoly0011s0190 Marchantia polymorpha
MBI19_g45589_MAGBIO Magnolia biondii
MCO02G281 Micromonas commoda
MD00G1025200 Malus domestica
Medtr7g088740 Medicago truncatula
Medtr8g064950 Medicago truncatula
MELO3C019135.2 Cucumis melo
Migut.K00161 Erythranthe guttata
MSTRG.26179 Avicennia marina
Nitab4.5_0000092g0020 Nicotiana tabacum
Nitab4.5_0000092g0030 Nicotiana tabacum
Nitab4.5_0001388g0020 Nicotiana tabacum
Nitab4.5_0001388g0030 Nicotiana tabacum
Oeu060769.1 Olea europaea
Oeu064748.1 Olea europaea
Oeu064749.1 Olea europaea
Os07g0662900 Oryza sativa ssp. japonica
Peaxi162Scf00002g04712 Petunia axillaris
Peaxi162Scf00002g04713 Petunia axillaris
Peaxi162Scf01017g00016 Petunia axillaris
Peaxi162Scf01017g00017 Petunia axillaris
PGR142G3097 Punica granatum
Phvul.001G117500 Phaseolus vulgaris
Phvul.001G117700 Phaseolus vulgaris
Potri.006G031700 Populus trichocarpa
Potri.016G028900 Populus trichocarpa
Pp3c15_25660 Physcomitrium patens
PRCOL_00001049 Prasinoderma coloniale
Prupe.7G019400 Prunus persica
Psat0s698g0160 Pisum sativum
PSO339G3620 Papaver somniferum
PSO384G1877 Papaver somniferum
QL07p004539 Quercus lobata
QL07p013739 Quercus lobata
RcHm_v2.0_Chr3g0494731 Rosa chinensis
Rhsim08G0135700 Rhododendron simsii
RhsimUnG0019100 Rhododendron simsii
RhsimUnG0019400 Rhododendron simsii
RhsimUnG0019600 Rhododendron simsii
Sabra06G0021100 Salix brachista
Sabra16G0033000 Salix brachista
SalBow1G2268 Salvia bowleyana
Sc19g0007930 Simmondsia chinensis
Sed0003650 Sechium edule
SGA_v2.0_scaffold240G44129 Striga asiatica
SMO203G0025 Selaginella moellendorffii
SMO327G0045 Selaginella moellendorffii
Solyc02g020980.4 Solanum lycopersicum
Sopen00g008430 Solanum pennellii
Sopen02g004480 Solanum pennellii
Sopen02g004490 Solanum pennellii
Sopen02g004500 Solanum pennellii
Sopen02g004780 Solanum pennellii
Sp4g23170 Schrenkiella parvula
TAR633G2118 Trochodendron aralioides
THA.LOC104803226 Tarenaya hassleriana
Thecc.05G118400 Theobroma cacao
Thhalv10016195m.g Eutrema salsugineum
TPR.G23186 Trifolium pratense
TPR.G36183 Trifolium pratense
TWI74G0513 Tripterygium wilfordii
unitig_736.g22282 Utricularia gibba
vmacro07764 Vaccinium macrocarpon
Zm00001eb002650 Zea mays
Zm00001eb016430 Zea mays
Zm00001eb197360 Zea mays
Zm00001eb329980 Zea mays

User provided reference genes

Program Settings