Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p01290 Brassica napus
A10p25800 Brassica napus
Aa31LG3G15270 Aethionema arabicum
Actinidia30326 Actinidia chinensis
Ah.10g034130 Amaranthus hybridus
AL6G22740 Arabidopsis lyrata
arahy.Tifrunner.gnm1.ann1.6D5JL1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GAY7D4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IMU44M Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TY68CU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UTD444 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VQ1HGR Arachis hypogaea
AT5G11960 Arabidopsis thaliana
ATR0789G137 Amborella trichopoda
Atru.chr7.1939 Acer truncatum
AUR62009122 Chenopodium quinoa
AUR62039137 Chenopodium quinoa
BcaB03g16563 Brassica carinata
BcaC03g13403 Brassica carinata
BcaNung02637 Brassica carinata
BolC2t06496H Brassica oleracea
BolC9t59317H Brassica oleracea
BolC9t59318H Brassica oleracea
BraA02t05108Z Brassica rapa
BraA10t44644Z Brassica rapa
C02p05500 Brassica napus
C09p64870 Brassica napus
CAN.G130.11 Capsicum annuum
CANSAT25G2280 Cannabis sativa
CARHR201170 Cardamine hirsuta
Carub.0006s1050 Capsella rubella
Ca_13152_v3 Cicer arietinum L.
CBR_g50008 Chara braunii
Cc08_g10890 Coffea canephora
CDE06G1634 Ceratophyllum demersum
Cfa017974 Carpinus fangiana
Ciclev10008891m.g Citrus clementina
CiPaw.15G037000 Carya illinoinensis
CiPaw.16G027100 Carya illinoinensis
ClCG05G017990 Citrullus lanatus
COL.COLO4_21084 Corchorus olitorius
Cpa.g.sc7.159 Carica papaya
Cpa.g.sc7.160 Carica papaya
Cre10.g419700 Chlamydomonas reinhardtii
CsaV3_4G035770 Cucumis sativus L.
CSS0003098 Camellia sinensis var. sinensis
CSS0005464 Camellia sinensis var. sinensis
CSS0034519 Camellia sinensis var. sinensis
DCAR_007733 Daucus carota
Dinv22878 Davidia involucrata
Dinv28005 Davidia involucrata
Duzib150G1607 Durio zibethinus
ECA233G4949 Erigeron canadensis
EL10Ac2g03829 Beta vulgaris
Eucgr.C03058 Eucalyptus grandis
FAN15G2750 Fragaria x ananassa
FAN24G2134 Fragaria x ananassa
FAN27G1630 Fragaria x ananassa
FvH4_2g31600 Fragaria vesca
Glyma.04G052700 Glycine max
Glyma.06G053100 Glycine max
Glyma.14G097400 Glycine max
Glyma.17G227100 Glycine max
Gohir.A07G021950 Gossypium hirsutum
Gohir.A13G187700 Gossypium hirsutum
Gohir.D07G021800 Gossypium hirsutum
Gohir.D07G021900 Gossypium hirsutum
Gohir.D13G194600 Gossypium hirsutum
Gorai.001G022500 Gossypium raimondii
Gorai.013G220600 Gossypium raimondii
GSVIVG01035376001 Vitis vinifera
HanXRQChr08g0226511 Helianthus annuus
Haze_18156 Corylus avellana
Hma1.2p1_0544F.1_g175630 Hydrangea macrophylla
HPP92_007653 Vanilla planifolia
Hund03325 Selenicereus undatus
Hund19438 Selenicereus undatus
Lalb_Chr11g0063171 Lupinus albus
Lalb_Chr14g0366381 Lupinus albus
Lalb_Chr22g0356141 Lupinus albus
Lj1g0000731 Lotus japonicus
Lj7A260G18 Lonicera japonica
Lj8A530G14 Lonicera japonica
Lsat_1_v5_gn_6_14601 Lactuca sativa
Manes.03G050000 Manihot esculenta
Mapoly0049s0128 Marchantia polymorpha
MBI01_g21122_MAGBIO Magnolia biondii
MCO12G408 Micromonas commoda
MD01G1007700 Malus domestica
MD08G1064900 Malus domestica
MD11G1243300 Malus domestica
MD15G1056700 Malus domestica
Medtr1g015820 Medicago truncatula
MELO3C016882.2 Cucumis melo
Migut.A00114 Erythranthe guttata
MSTRG.25961 Avicennia marina
Nitab4.5_0000268g0140 Nicotiana tabacum
Nitab4.5_0000972g0030 Nicotiana tabacum
Nn8g38796 Nelumbo nucifera
Oeu003996.1 Olea europaea
Oeu040341.1 Olea europaea
Os01g0708300 Oryza sativa ssp. japonica
Peaxi162Scf01088g00005 Petunia axillaris
PGR044G2019 Punica granatum
PGSC0003DMG400031356 Solanum tuberosum
Phvul.001G037500 Phaseolus vulgaris
Phvul.009G078900 Phaseolus vulgaris
Potri.006G226000 Populus trichocarpa
Potri.018G060500 Populus trichocarpa
Pp3c7_50 Physcomitrium patens
PRCOL_00001271 Prasinoderma coloniale
Prupe.1G409300 Prunus persica
Psat6g021480 Pisum sativum
PSO210G6321 Papaver somniferum
PSO210G6435 Papaver somniferum
QL02p000736 Quercus lobata
RcHm_v2.0_Chr1g0383701 Rosa chinensis
RcHm_v2.0_Chr6g0311221 Rosa chinensis
Rhsim11G0042200 Rhododendron simsii
Sabra06G0174700 Salix brachista
Sabra18G0054400 Salix brachista
SalBow4G3021 Salvia bowleyana
Sc23g0005690 Simmondsia chinensis
Sed0001440 Sechium edule
Sed0024799 Sechium edule
SEGI_34785 Sequoiadendron giganteum
SGA_v2.0_scaffold20G09204 Striga asiatica
Solyc06g036780.3 Solanum lycopersicum
Sopen06g012940 Solanum pennellii
Sp6g31630 Schrenkiella parvula
TAR369G0158 Trochodendron aralioides
TAR636G1106 Trochodendron aralioides
THA.LOC104811236 Tarenaya hassleriana
Thecc.09G057100 Theobroma cacao
Thhalv10014010m.g Eutrema salsugineum
TPR.G13039 Trifolium pratense
TWI32G0330 Tripterygium wilfordii
TWI34G0632 Tripterygium wilfordii
unitig_88.g27677 Utricularia gibba
vmacro00123 Vaccinium macrocarpon
VMungo0647G2045 Vigna mungo
VMungo1309G2963 Vigna mungo
Zm00001eb155260 Zea mays

User provided reference genes

Program Settings