Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p34780 Brassica napus
A08p32570 Brassica napus
Aa31LG1G1910 Aethionema arabicum
Aa31LG2G5770 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.1953 Anthoceros agrestis
Actinidia19557 Actinidia chinensis
Actinidia19558 Actinidia chinensis
Actinidia37728 Actinidia chinensis
Ah.02g128920 Amaranthus hybridus
AL1G24500 Arabidopsis lyrata
AL5G15650 Arabidopsis lyrata
Aqoxy5G03173 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.JN3C7K Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZY683S Arachis hypogaea
AT1G12850 Arabidopsis thaliana
AT3G26780 Arabidopsis thaliana
ATR0582G189 Amborella trichopoda
Atru.chr6.2642 Acer truncatum
AUR62037835 Chenopodium quinoa
AUR62041074 Chenopodium quinoa
BcaB03g13161 Brassica carinata
BcaB07g30210 Brassica carinata
BcaC03g17388 Brassica carinata
BolC2t11405H Brassica oleracea
BolC5t29789H Brassica oleracea
BolC8t49199H Brassica oleracea
BraA02t08484Z Brassica rapa
BraA08t35181Z Brassica rapa
C02p53340 Brassica napus
C05p10420 Brassica napus
C08p15720 Brassica napus
CAN.G473.156 Capsicum annuum
CANSAT64G1152 Cannabis sativa
CARHR013180 Cardamine hirsuta
CARHR120940 Cardamine hirsuta
CARHR147850 Cardamine hirsuta
Carub.0001s1260 Capsella rubella
Carub.0005s0483 Capsella rubella
Ca_26608_v3 Cicer arietinum L.
CBR_g2835 Chara braunii
Cc07_g01210 Coffea canephora
CDE02G3855 Ceratophyllum demersum
CDE06G1073 Ceratophyllum demersum
Cfa007172 Carpinus fangiana
Ciclev10015374m.g Citrus clementina
CiPaw.03G003000 Carya illinoinensis
ClCG05G012720 Citrullus lanatus
COL.COLO4_13349 Corchorus olitorius
Cpa.g.sc70.78 Carica papaya
CSS0007293 Camellia sinensis var. sinensis
CSS0020784 Camellia sinensis var. sinensis
CSS0035997 Camellia sinensis var. sinensis
CSS0036880 Camellia sinensis var. sinensis
DCAR_002973 Daucus carota
Dinv33289 Davidia involucrata
Duzib147G0684 Durio zibethinus
Duzib187G0698 Durio zibethinus
Duzib264G0870 Durio zibethinus
ECA246G2144 Erigeron canadensis
EL10As7g23753 Beta vulgaris
Eucgr.G01940 Eucalyptus grandis
FAN02G3987 Fragaria x ananassa
FAN05G1132 Fragaria x ananassa
FAN09G1737 Fragaria x ananassa
FAN14G0182 Fragaria x ananassa
FvH4_6g54210 Fragaria vesca
Glyma.02G066000 Glycine max
Glyma.16G146900 Glycine max
Gohir.A07G232100 Gossypium hirsutum
Gohir.A10G070100 Gossypium hirsutum
Gohir.D07G239300 Gossypium hirsutum
Gohir.D10G081000 Gossypium hirsutum
Gorai.001G275400 Gossypium raimondii
Gorai.011G088100 Gossypium raimondii
GSVIVG01033003001 Vitis vinifera
HanXRQChr14g0451381 Helianthus annuus
Haze_14938 Corylus avellana
Hma1.2p1_0868F.1_g230570 Hydrangea macrophylla
HPP92_008243 Vanilla planifolia
Lalb_Chr02g0156821 Lupinus albus
Lalb_Chr06g0173771 Lupinus albus
Lj2g0017210 Lotus japonicus
Lj7A616T62 Lonicera japonica
Lsat_1_v5_gn_2_94460 Lactuca sativa
Manes.04G092300 Manihot esculenta
Manes.11G077500 Manihot esculenta
MBI07_g40342_MAGBIO Magnolia biondii
MD09G1004000 Malus domestica
MD17G1007700 Malus domestica
Medtr6g033275 Medicago truncatula
MELO3C014806.2 Cucumis melo
Migut.F00017 Erythranthe guttata
MSTRG.3045 Avicennia marina
Nitab4.5_0002172g0150 Nicotiana tabacum
Nitab4.5_0025697g0010 Nicotiana tabacum
Nn3g16305 Nelumbo nucifera
Nn4g22171 Nelumbo nucifera
Oeu003422.1 Olea europaea
Oeu039797.1 Olea europaea
Os11g0522000 Oryza sativa ssp. japonica
Peaxi162Scf00420g00087 Petunia axillaris
PGR083G1093 Punica granatum
PGSC0003DMG400020194 Solanum tuberosum
Phvul.004G070300 Phaseolus vulgaris
Potri.002G236600 Populus trichocarpa
Potri.014G145900 Populus trichocarpa
Pp3c21_20660 Physcomitrium patens
PRCOL_00002808 Prasinoderma coloniale
Prupe.3G312600 Prunus persica
Psat1g097480 Pisum sativum
PSO017G1316 Papaver somniferum
PSO478G3188 Papaver somniferum
QL02p069878 Quercus lobata
RcHm_v2.0_Chr2g0176401 Rosa chinensis
Rhsim10G0001700 Rhododendron simsii
Sabra02G0180200 Salix brachista
Sabra14G0109800 Salix brachista
SalBow4G2016 Salvia bowleyana
Sc03g0004830 Simmondsia chinensis
Sed0007531 Sechium edule
SEGI_01379 Sequoiadendron giganteum
SEGI_20575 Sequoiadendron giganteum
SEGI_29311 Sequoiadendron giganteum
SGA_v2.0_scaffold173G39196 Striga asiatica
SGA_v2.0_scaffold44G16946 Striga asiatica
Sopen02g039150 Solanum pennellii
Sp1g11430 Schrenkiella parvula
Sp2g15910 Schrenkiella parvula
TAR371G0255 Trochodendron aralioides
TAR629G1483 Trochodendron aralioides
THA.LOC104805304 Tarenaya hassleriana
THA.LOC104823996 Tarenaya hassleriana
Thecc.04G046000 Theobroma cacao
Thhalv10004350m.g Eutrema salsugineum
Thhalv10007881m.g Eutrema salsugineum
TPR.G36663 Trifolium pratense
TWI32G0425 Tripterygium wilfordii
unitig_37.g12040 Utricularia gibba
unitig_37.g12041 Utricularia gibba
vmacro22240 Vaccinium macrocarpon
VMungo0464G0174 Vigna mungo
VMungo0464G1790 Vigna mungo
Zm00001eb170350 Zea mays

User provided reference genes

Program Settings