Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p15530 Brassica napus
A07p29040 Brassica napus
A07p29060 Brassica napus
A07p40740 Brassica napus
Aa31LG4G5330 Aethionema arabicum
Aa31LG7G4080 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.2792 Anthoceros agrestis
Actinidia38015 Actinidia chinensis
Ah.01g011450 Amaranthus hybridus
AL1G31960 Arabidopsis lyrata
AL2G35040 Arabidopsis lyrata
Aqoxy3G02057 Aquilegia oxysepala
AT1G19370 Arabidopsis thaliana
AT1G75140 Arabidopsis thaliana
ATR0829G103 Amborella trichopoda
Atru.chr13.513 Acer truncatum
Atru.chr8.2603 Acer truncatum
AUR62017754 Chenopodium quinoa
AUR62032897 Chenopodium quinoa
BcaB02g06995 Brassica carinata
BcaB02g07002 Brassica carinata
BcaB02g07009 Brassica carinata
BcaB07g31957 Brassica carinata
BcaC07g37382 Brassica carinata
BcaNung07223 Brassica carinata
BcaNung07297 Brassica carinata
BolC5t30482H Brassica oleracea
BolC6t38403H Brassica oleracea
BraA06t24665Z Brassica rapa
BraA07t30544Z Brassica rapa
C05p17770 Brassica napus
C06p32820 Brassica napus
CAN.G1126.42 Capsicum annuum
CARHR019960 Cardamine hirsuta
CARHR068470 Cardamine hirsuta
Carub.0001s1896 Capsella rubella
Carub.0002s2195 Capsella rubella
Ca_13346_v3 Cicer arietinum L.
CBR_g49554 Chara braunii
Cc03_g06460 Coffea canephora
CDE11G0691 Ceratophyllum demersum
Cfa018137 Carpinus fangiana
Ciclev10000534m.g Citrus clementina
CiPaw.15G075700 Carya illinoinensis
ClCG08G015210 Citrullus lanatus
ClCG08G015240 Citrullus lanatus
COL.COLO4_26340 Corchorus olitorius
Cpa.g.sc64.72 Carica papaya
Cre13.g578600 Chlamydomonas reinhardtii
CsaV3_2G028560 Cucumis sativus L.
CsaV3_2G028600 Cucumis sativus L.
CSS0027115 Camellia sinensis var. sinensis
CSS0028044 Camellia sinensis var. sinensis
DCAR_019524 Daucus carota
DCAR_020966 Daucus carota
Dinv39406 Davidia involucrata
Duzib041G0136 Durio zibethinus
Duzib093G0415 Durio zibethinus
Duzib116G0819 Durio zibethinus
ECA246G5303 Erigeron canadensis
EL10Ac9g23018 Beta vulgaris
Eucgr.F01908 Eucalyptus grandis
FAN15G3722 Fragaria x ananassa
FAN27G1201 Fragaria x ananassa
FvH4_2g39960 Fragaria vesca
Glyma.14G076200 Glycine max
Glyma.17G249600 Glycine max
Gohir.A05G195300 Gossypium hirsutum
Gohir.A06G010900 Gossypium hirsutum
Gohir.D05G198500 Gossypium hirsutum
Gohir.D06G008300 Gossypium hirsutum
Gorai.009G203600 Gossypium raimondii
Gorai.010G011100 Gossypium raimondii
GSVIVG01009686001 Vitis vinifera
HanXRQChr05g0151851 Helianthus annuus
Haze_17987 Corylus avellana
Hma1.2p1_0077F.1_g039700 Hydrangea macrophylla
Lalb_Chr22g0355491 Lupinus albus
Lj4P784T41 Lonicera japonica
Lj5g0021582 Lotus japonicus
Lsat_1_v5_gn_5_29021 Lactuca sativa
Manes.05G161700 Manihot esculenta
Mapoly0094s0054 Marchantia polymorpha
MBI04_g21134_MAGBIO Magnolia biondii
MBI04_g27271_MAGBIO Magnolia biondii
MCO12G330 Micromonas commoda
MD08G1033400 Malus domestica
MD15G1030000 Malus domestica
Medtr1g022045 Medicago truncatula
MELO3C010930.2 Cucumis melo
Migut.I00006 Erythranthe guttata
MSTRG.11457 Avicennia marina
MSTRG.23132 Avicennia marina
Nitab4.5_0000110g0380 Nicotiana tabacum
Nitab4.5_0003783g0070 Nicotiana tabacum
Nn3g19273 Nelumbo nucifera
Nn5g28261 Nelumbo nucifera
Oeu016389.1 Olea europaea
Oeu052497.1 Olea europaea
Os02g0690000 Oryza sativa ssp. japonica
Os06g0115200 Oryza sativa ssp. japonica
Peaxi162Scf00690g00113 Petunia axillaris
PGR031G2270 Punica granatum
PGSC0003DMG400005144 Solanum tuberosum
Phvul.001G015400 Phaseolus vulgaris
Potri.002G262900 Populus trichocarpa
Potri.014G180900 Populus trichocarpa
Pp3c10_23930 Physcomitrium patens
Pp3c20_21760 Physcomitrium patens
Prupe.1G381500 Prunus persica
Psat6g007480 Pisum sativum
PSO063G3485 Papaver somniferum
PSO782G4716 Papaver somniferum
QL02p007937 Quercus lobata
RcHm_v2.0_Chr6g0300791 Rosa chinensis
Rhsim07G0237100 Rhododendron simsii
Sabra02G0199700 Salix brachista
SalBow5G1122 Salvia bowleyana
Sc02g0006300 Simmondsia chinensis
Sed0011840 Sechium edule
Sed0021548 Sechium edule
SEGI_39092 Sequoiadendron giganteum
SGA_v2.0_scaffold90G27910 Striga asiatica
SHI08167 Sapria himalayana
SHI17314 Sapria himalayana
SMO361G0791 Selaginella moellendorffii
Solyc04g080180.1 Solanum lycopersicum
Sopen04g033770 Solanum pennellii
Sp1g17280 Schrenkiella parvula
Sp5g30270 Schrenkiella parvula
TAR376G0813 Trochodendron aralioides
THA.LOC104806374 Tarenaya hassleriana
THA.LOC104813841 Tarenaya hassleriana
Thecc.08G024400 Theobroma cacao
Thhalv10009294m.g Eutrema salsugineum
Thhalv10018268m.g Eutrema salsugineum
TPR.G29756 Trifolium pratense
TWI73G1022 Tripterygium wilfordii
unitig_0.g1436 Utricularia gibba
unitig_0.g1437 Utricularia gibba
vmacro04517 Vaccinium macrocarpon
VMungo0647G0443 Vigna mungo
Zm00001eb269050 Zea mays

User provided reference genes

Program Settings