Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p04410 Brassica napus
A06p31940 Brassica napus
A09p08930 Brassica napus
Aa31LG1G16850 Aethionema arabicum
Aa31LG3G17030 Aethionema arabicum
Actinidia36600 Actinidia chinensis
Ah.02g122180 Amaranthus hybridus
Ah.03g142470 Amaranthus hybridus
AL6G20570 Arabidopsis lyrata
AL8G42620 Arabidopsis lyrata
Aqoxy6G00585 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.H9PZRL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.U0X1YR Arachis hypogaea
AT5G10110 Arabidopsis thaliana
AT5G65120 Arabidopsis thaliana
ATR0564G355 Amborella trichopoda
Atru.chr4.126 Acer truncatum
AUR62002025 Chenopodium quinoa
AUR62003775 Chenopodium quinoa
BcaB02g09863 Brassica carinata
BcaB02g09865 Brassica carinata
BcaB04g20004 Brassica carinata
BcaC01g02741 Brassica carinata
BcaC04g23269 Brassica carinata
BcaC05g28701 Brassica carinata
BcaNung06448 Brassica carinata
BolC3t13020H Brassica oleracea
BolC3t18363H Brassica oleracea
BolC9t53937H Brassica oleracea
BraA03t09786Z Brassica rapa
BraA06t26127Z Brassica rapa
BraA09t36544Z Brassica rapa
C03p04880 Brassica napus
C03p45450 Brassica napus
C03p61010 Brassica napus
C09p10370 Brassica napus
CAN.G113.1 Capsicum annuum
CANSAT01G2249 Cannabis sativa
CARHR203180 Cardamine hirsuta
CARHR279030 Cardamine hirsuta
Carub.0006s0857 Capsella rubella
Carub.0008s2596 Capsella rubella
Ca_17725_v3 Cicer arietinum L.
Cc07_g15400 Coffea canephora
CDE10G0726 Ceratophyllum demersum
CDE10G0861 Ceratophyllum demersum
Cfa002685 Carpinus fangiana
Ciclev10025982m.g Citrus clementina
CiPaw.03G140300 Carya illinoinensis
CiPaw.04G097600 Carya illinoinensis
ClCG01G018910 Citrullus lanatus
COL.COLO4_09939 Corchorus olitorius
Cpa.g.sc20.237 Carica papaya
CsaV3_6G045590 Cucumis sativus L.
CSS0034809 Camellia sinensis var. sinensis
DCAR_014236 Daucus carota
Dinv16302 Davidia involucrata
Dinv21926 Davidia involucrata
Duzib147G0288 Durio zibethinus
ECA232G0837 Erigeron canadensis
EL10Ac6g15084 Beta vulgaris
Eucgr.H04811 Eucalyptus grandis
FAN19G0499 Fragaria x ananassa
FAN23G1139 Fragaria x ananassa
FAN26G1901 Fragaria x ananassa
FAN28G0785 Fragaria x ananassa
FvH4_1g21240 Fragaria vesca
Glyma.05G180000 Glycine max
Glyma.08G137700 Glycine max
Gohir.A11G052900 Gossypium hirsutum
Gohir.A12G079125 Gossypium hirsutum
Gohir.D11G056300 Gossypium hirsutum
Gohir.D12G096600 Gossypium hirsutum
Gorai.007G061500 Gossypium raimondii
Gorai.008G104700 Gossypium raimondii
GSVIVG01004251001 Vitis vinifera
HanXRQChr15g0484181 Helianthus annuus
Haze_24956 Corylus avellana
HPP92_004303 Vanilla planifolia
Hund13638 Selenicereus undatus
Hund16271 Selenicereus undatus
Lalb_Chr07g0185101 Lupinus albus
Lalb_Chr13g0296051 Lupinus albus
Lj2C552G1 Lonicera japonica
Lj4A885T20 Lonicera japonica
Lj4g0005197 Lotus japonicus
Lsat_1_v5_gn_4_141700 Lactuca sativa
Lsat_1_v5_gn_5_43440 Lactuca sativa
Manes.12G136900 Manihot esculenta
MBI05_g34472_MAGBIO Magnolia biondii
MD01G1027000 Malus domestica
MD15G1327000 Malus domestica
Medtr8g090365 Medicago truncatula
MELO3C007770.2 Cucumis melo
Migut.H02371 Erythranthe guttata
MSTRG.23333 Avicennia marina
MSTRG.2558 Avicennia marina
Nitab4.5_0000104g0330 Nicotiana tabacum
Nitab4.5_0004120g0030 Nicotiana tabacum
Nn1g05302 Nelumbo nucifera
Nn5g29063 Nelumbo nucifera
Oeu032161.1 Olea europaea
Oeu032163.1 Olea europaea
Os02g0752300 Oryza sativa ssp. japonica
Peaxi162Scf00422g00025 Petunia axillaris
PGR102G1853 Punica granatum
PGSC0003DMG400020626 Solanum tuberosum
Phvul.002G254400 Phaseolus vulgaris
Potri.005G077400 Populus trichocarpa
Potri.007G090500 Populus trichocarpa
Prupe.6G182000 Prunus persica
Psat7g054080 Pisum sativum
PSO210G6319 Papaver somniferum
PSO447G0179 Papaver somniferum
QL04p017893 Quercus lobata
QL06p049976 Quercus lobata
RcHm_v2.0_Chr2g0115081 Rosa chinensis
Sabra07G0074200 Salix brachista
SalBow3G4455 Salvia bowleyana
Sc16g0005560 Simmondsia chinensis
Sed0001570 Sechium edule
Sed0017418 Sechium edule
SGA_v2.0_scaffold34G13602 Striga asiatica
SGA_v2.0_scaffold47G17761 Striga asiatica
Solyc04g054900.3 Solanum lycopersicum
Sopen04g024710 Solanum pennellii
Sp2g28200 Schrenkiella parvula
Sp6g33290 Schrenkiella parvula
TAR381G0610 Trochodendron aralioides
TAR625G0717 Trochodendron aralioides
THA.LOC104801720 Tarenaya hassleriana
THA.LOC104818490 Tarenaya hassleriana
THA.LOC104819305 Tarenaya hassleriana
Thecc.01G104400 Theobroma cacao
Thhalv10004547m.g Eutrema salsugineum
Thhalv10014214m.g Eutrema salsugineum
TPR.G2173 Trifolium pratense
TWI53G1353 Tripterygium wilfordii
TWI74G0266 Tripterygium wilfordii
TWI77G0207 Tripterygium wilfordii
vmacro12947 Vaccinium macrocarpon
VMungo0251G2777 Vigna mungo
Zm00001eb194230 Zea mays

User provided reference genes

Program Settings