Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p31660 Brassica napus
A06p11170 Brassica napus
A08p31700 Brassica napus
Aa31LG2G8790 Aethionema arabicum
Actinidia33832 Actinidia chinensis
Ah.03g133360 Amaranthus hybridus
AL1G27270 Arabidopsis lyrata
Aqoxy6G00392 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.I1A2NR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZL3PAB Arachis hypogaea
AT1G15190 Arabidopsis thaliana
ATR0311G001 Amborella trichopoda
Atru.chr4.616 Acer truncatum
Atru.chr6.3151 Acer truncatum
Atru.chr6.974 Acer truncatum
AUR62005501 Chenopodium quinoa
AUR62024239 Chenopodium quinoa
BcaB02g06584 Brassica carinata
BcaB03g13072 Brassica carinata
BcaC05g25447 Brassica carinata
BcaC07g38772 Brassica carinata
BolC2t10994H Brassica oleracea
BolC5t30066H Brassica oleracea
BolC8t49330H Brassica oleracea
BraA02t08169Z Brassica rapa
BraA06t24297Z Brassica rapa
BraA08t35092Z Brassica rapa
C02p49000 Brassica napus
C02p49040 Brassica napus
C05p13290 Brassica napus
C05p26340 Brassica napus
C08p17050 Brassica napus
CAN.G516.6 Capsicum annuum
CARHR015700 Cardamine hirsuta
Carub.0001s1494 Capsella rubella
Ca_00097_v3 Cicer arietinum L.
Ca_29935_v3 Cicer arietinum L.
Ciclev10001162m.g Citrus clementina
CiPaw.05G041500 Carya illinoinensis
ClCG09G014160 Citrullus lanatus
COL.COLO4_22382 Corchorus olitorius
Cpa.g.sc72.34 Carica papaya
CsaV3_6G037300 Cucumis sativus L.
CSS0043111 Camellia sinensis var. sinensis
DCAR_001409 Daucus carota
Dinv02718 Davidia involucrata
Dinv19341 Davidia involucrata
Duzib187G0918 Durio zibethinus
ECA234G0387 Erigeron canadensis
ECA236G3147 Erigeron canadensis
ECA248G2956 Erigeron canadensis
EL10Ac4g08760 Beta vulgaris
EL10Ac6g13873 Beta vulgaris
FAN02G0608 Fragaria x ananassa
FAN02G3216 Fragaria x ananassa
FAN02G4273 Fragaria x ananassa
FAN04G1743 Fragaria x ananassa
FAN05G3957 Fragaria x ananassa
FAN08G2621 Fragaria x ananassa
FAN11G0652 Fragaria x ananassa
FAN12G2268 Fragaria x ananassa
FAN12G4281 Fragaria x ananassa
FAN13G2550 Fragaria x ananassa
FAN15G2678 Fragaria x ananassa
FAN20G0407 Fragaria x ananassa
FAN20G1442 Fragaria x ananassa
FAN20G2254 Fragaria x ananassa
FAN20G2269 Fragaria x ananassa
FAN20G2361 Fragaria x ananassa
FAN22G1821 Fragaria x ananassa
FAN22G2313 Fragaria x ananassa
FAN24G2323 Fragaria x ananassa
FvH4_2g02380 Fragaria vesca
FvH4_2g02450 Fragaria vesca
FvH4_2g04910 Fragaria vesca
FvH4_3g08610 Fragaria vesca
FvH4_4g13350 Fragaria vesca
FvH4_4g36540 Fragaria vesca
FvH4_4g36551 Fragaria vesca
FvH4_5g29740 Fragaria vesca
Glyma.08G183700 Glycine max
Gohir.A11G210433 Gossypium hirsutum
Gohir.D12G092500 Gossypium hirsutum
Gorai.008G100000 Gossypium raimondii
HanXRQChr10g0294801 Helianthus annuus
HanXRQChr10g0300271 Helianthus annuus
HanXRQChr11g0337491 Helianthus annuus
Lalb_Chr15g0090581 Lupinus albus
Lj1C922T21 Lonicera japonica
Lj6g0020123 Lotus japonicus
Lsat_1_v5_gn_5_107520 Lactuca sativa
Lsat_1_v5_gn_7_79481 Lactuca sativa
Manes.12G149900 Manihot esculenta
Manes.13G081800 Manihot esculenta
MBI17_g24510_MAGBIO Magnolia biondii
MBI17_g24663_MAGBIO Magnolia biondii
MD15G1420000 Malus domestica
Medtr2g007870 Medicago truncatula
MELO3C014385.2 Cucumis melo
Migut.L00049 Erythranthe guttata
Nitab4.5_0001582g0090 Nicotiana tabacum
Nitab4.5_0002138g0070 Nicotiana tabacum
Nn1g04620 Nelumbo nucifera
Nn1g06067 Nelumbo nucifera
Nn5g28774 Nelumbo nucifera
Oeu000200.2 Olea europaea
Oeu032746.1 Olea europaea
Oeu035198.1 Olea europaea
Peaxi162Scf00025g00263 Petunia axillaris
PGR042G0513 Punica granatum
PGSC0003DMG400024738 Solanum tuberosum
PGSC0003DMG400035592 Solanum tuberosum
PGSC0003DMG401012933 Solanum tuberosum
Phvul.006G211300 Phaseolus vulgaris
Potri.001G306800 Populus trichocarpa
Potri.019G002300 Populus trichocarpa
Prupe.1G566000 Prunus persica
Psat1g219600 Pisum sativum
PSO730G0002 Papaver somniferum
QL11p019060 Quercus lobata
RcHm_v2.0_Chr7g0223241 Rosa chinensis
RcHm_v2.0_Chr7g0223251 Rosa chinensis
Sabra19G0004600 Salix brachista
Sabra19G0015300 Salix brachista
SalBow5G2993 Salvia bowleyana
Sc04g0009640 Simmondsia chinensis
Sed0001621 Sechium edule
Sed0003606 Sechium edule
SGA_v2.0_scaffold47G17682 Striga asiatica
SGA_v2.0_scaffold65G22173 Striga asiatica
Solyc11g005490.1 Solanum lycopersicum
Sopen11g001490 Solanum pennellii
Sp1g13500 Schrenkiella parvula
Sp2g12560 Schrenkiella parvula
TAR381G1643 Trochodendron aralioides
TAR624G0561 Trochodendron aralioides
Thecc.01G118700 Theobroma cacao
Thhalv10009974m.g Eutrema salsugineum
TPR.G19715 Trifolium pratense
TWI31G0537 Tripterygium wilfordii
TWI79G0764 Tripterygium wilfordii
unitig_32.g10686 Utricularia gibba
VMungo0540G1828 Vigna mungo

User provided reference genes

Program Settings