Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
Actinidia06715 Actinidia chinensis
Aqoxy1G01037 Aquilegia oxysepala
Aqoxy2G01602 Aquilegia oxysepala
Atru.chr12.921 Acer truncatum
Atru.chr3.3495 Acer truncatum
CAN.G612.11 Capsicum annuum
CANSAT56G0274 Cannabis sativa
Ca_10460_v3 Cicer arietinum L.
Cc02_g10500 Coffea canephora
Cfa001771 Carpinus fangiana
Cfa010131 Carpinus fangiana
Ciclev10029845m.g Citrus clementina
Ciclev10033003m.g Citrus clementina
Ciclev10033091m.g Citrus clementina
CiPaw.01G264700 Carya illinoinensis
CiPaw.02G169800 Carya illinoinensis
CiPaw.13G144100 Carya illinoinensis
CiPaw.14G106000 Carya illinoinensis
ClCG05G021460 Citrullus lanatus
ClCG08G007940 Citrullus lanatus
COL.COLO4_32872 Corchorus olitorius
Cpa.g.sc128.74 Carica papaya
CsaV3_2G032750 Cucumis sativus L.
CsaV3_5G035790 Cucumis sativus L.
CSS0028161 Camellia sinensis var. sinensis
CSS0034177 Camellia sinensis var. sinensis
DCAR_019059 Daucus carota
Duzib114G0655 Durio zibethinus
Duzib128G0830 Durio zibethinus
Duzib128G0918 Durio zibethinus
Duzib150G0717 Durio zibethinus
Duzib168G0406 Durio zibethinus
Eucgr.B03916 Eucalyptus grandis
Eucgr.G02732 Eucalyptus grandis
Eucgr.J00398 Eucalyptus grandis
Eucgr.J01032 Eucalyptus grandis
Eucgr.J01033 Eucalyptus grandis
FAN01G2164 Fragaria x ananassa
FAN02G4580 Fragaria x ananassa
FAN03G1417 Fragaria x ananassa
FAN06G1004 Fragaria x ananassa
FAN10G0320 Fragaria x ananassa
FAN10G3090 Fragaria x ananassa
FAN12G4274 Fragaria x ananassa
FvH4_7g06790 Fragaria vesca
Glyma.10G199500 Glycine max
Glyma.20G190800 Glycine max
Gohir.A01G128800 Gossypium hirsutum
Gohir.A05G084500 Gossypium hirsutum
Gohir.A05G290700 Gossypium hirsutum
Gohir.A05G393600 Gossypium hirsutum
Gohir.A07G105600 Gossypium hirsutum
Gohir.D01G118400 Gossypium hirsutum
Gohir.D04G021300 Gossypium hirsutum
Gohir.D05G087300 Gossypium hirsutum
Gohir.D05G291900 Gossypium hirsutum
Gohir.D07G109600 Gossypium hirsutum
Gorai.001G117700 Gossypium raimondii
Gorai.002G144400 Gossypium raimondii
Gorai.009G089100 Gossypium raimondii
Gorai.009G307700 Gossypium raimondii
Gorai.012G025400 Gossypium raimondii
Haze_16785 Corylus avellana
Haze_23519 Corylus avellana
Hma1.2p1_0454F.1_g156290 Hydrangea macrophylla
Lalb_Chr02g0151151 Lupinus albus
Lalb_Chr03g0036331 Lupinus albus
Lalb_Chr06g0170051 Lupinus albus
Lalb_Chr19g0129331 Lupinus albus
Lj5g0009089 Lotus japonicus
Lsat_1_v5_gn_8_22700 Lactuca sativa
Lsat_1_v5_gn_9_70641 Lactuca sativa
Manes.04G012000 Manihot esculenta
Manes.07G093500 Manihot esculenta
Manes.10G053200 Manihot esculenta
Manes.10G053300 Manihot esculenta
Manes.11G153500 Manihot esculenta
Medtr1g090837 Medicago truncatula
MELO3C012381.2 Cucumis melo
MELO3C019852.2 Cucumis melo
Migut.F01597 Erythranthe guttata
Migut.F01894 Erythranthe guttata
MSTRG.27507 Avicennia marina
MSTRG.9124 Avicennia marina
Nitab4.5_0000107g0230 Nicotiana tabacum
Nitab4.5_0000173g0300 Nicotiana tabacum
Nitab4.5_0000593g0370 Nicotiana tabacum
Nitab4.5_0001163g0010 Nicotiana tabacum
Nn2g13894 Nelumbo nucifera
Nn6g35176 Nelumbo nucifera
Oeu032435.1 Olea europaea
Oeu059829.1 Olea europaea
PGR044G0041 Punica granatum
PGR044G1405 Punica granatum
PGR102G2181 Punica granatum
PGR119G0321 Punica granatum
PGR142G4012 Punica granatum
PGSC0003DMG400016914 Solanum tuberosum
PGSC0003DMG400023483 Solanum tuberosum
PGSC0003DMG400027330 Solanum tuberosum
Phvul.007G141600 Phaseolus vulgaris
Potri.001G212300 Populus trichocarpa
Potri.008G029600 Populus trichocarpa
Potri.009G003400 Populus trichocarpa
Potri.010G231600 Populus trichocarpa
Potri.010G231700 Populus trichocarpa
Prupe.2G095100 Prunus persica
Prupe.6G114400 Prunus persica
Psat6g173960 Pisum sativum
QL01p014739 Quercus lobata
QL03p011649 Quercus lobata
QL03p021677 Quercus lobata
QL08p052941 Quercus lobata
RcHm_v2.0_Chr1g0336411 Rosa chinensis
Rhsim03G0110900 Rhododendron simsii
Sabra08G0019700 Salix brachista
Sabra08G0019800 Salix brachista
Sabra10G0179600 Salix brachista
SalBow4G2705 Salvia bowleyana
SalBow6G1975 Salvia bowleyana
Sc20g0001450 Simmondsia chinensis
Sc25g0001350 Simmondsia chinensis
Sed0006013 Sechium edule
Sed0009329 Sechium edule
Sed0010031 Sechium edule
Sed0018085 Sechium edule
SHI54636 Sapria himalayana
Solyc03g071710.1 Solanum lycopersicum
Solyc11g007860.1 Solanum lycopersicum
Sopen03g019970 Solanum pennellii
Sopen05g033870 Solanum pennellii
Sopen06g031160 Solanum pennellii
Sopen11g003720 Solanum pennellii
TAR623G1332 Trochodendron aralioides
TAR633G0523 Trochodendron aralioides
TAR636G3524 Trochodendron aralioides
Thecc.09G296200 Theobroma cacao
Thecc.10G090600 Theobroma cacao
TPR.G37843 Trifolium pratense
TWI38G0392 Tripterygium wilfordii
TWI63G0695 Tripterygium wilfordii
TWI79G0532 Tripterygium wilfordii
VMungo0720G0262 Vigna mungo

User provided reference genes

Program Settings