Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p61580 Brassica napus
Aa31LG2G17190 Aethionema arabicum
Aa31LG9G6190 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.1981 Anthoceros agrestis
Actinidia13324 Actinidia chinensis
Actinidia30264 Actinidia chinensis
Ah.16g105570 Amaranthus hybridus
AL7G18970 Arabidopsis lyrata
Aqoxy7G03804 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.B6YE6K Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.P7Z4SB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.R6A5BY Arachis hypogaea
AT4G32770 Arabidopsis thaliana
ATR0315G120 Amborella trichopoda
Atru.chr7.2133 Acer truncatum
AUR62009303 Chenopodium quinoa
AUR62041718 Chenopodium quinoa
BolC7t46379H Brassica oleracea
BraA03t15200Z Brassica rapa
C07p59340 Brassica napus
CAN.G21.50 Capsicum annuum
CANSAT25G0630 Cannabis sativa
CARHR240760 Cardamine hirsuta
Carub.0007s0772 Capsella rubella
Ca_15604_v3 Cicer arietinum L.
CBR_g222 Chara braunii
Cc07_g15020 Coffea canephora
Cc08_g09240 Coffea canephora
CDE02G1858 Ceratophyllum demersum
CDE05G0893 Ceratophyllum demersum
CDE05G1694 Ceratophyllum demersum
CDE05G2043 Ceratophyllum demersum
CDE08G0186 Ceratophyllum demersum
Cfa013356 Carpinus fangiana
Cfa013357 Carpinus fangiana
Cfa013434 Carpinus fangiana
Ciclev10008169m.g Citrus clementina
CiPaw.07G205300 Carya illinoinensis
CiPaw.08G024700 Carya illinoinensis
ClCG08G012300 Citrullus lanatus
COL.COLO4_18671 Corchorus olitorius
Cpa.g.sc7.259 Carica papaya
Cre01.g013801 Chlamydomonas reinhardtii
CsaV3_2G030970 Cucumis sativus L.
CSS0024291 Camellia sinensis var. sinensis
CSS0027627 Camellia sinensis var. sinensis
DCAR_003119 Daucus carota
Dinv08074 Davidia involucrata
Dinv14245 Davidia involucrata
Duzib150G0232 Durio zibethinus
ECA246G0277 Erigeron canadensis
EL10Ac2g04046 Beta vulgaris
Eucgr.C02909 Eucalyptus grandis
FAN15G3230 Fragaria x ananassa
FAN20G2881 Fragaria x ananassa
FAN24G1627 Fragaria x ananassa
FAN27G3010 Fragaria x ananassa
FvH4_2g35770 Fragaria vesca
Glyma.04G082300 Glycine max
Glyma.04G082500 Glycine max
Glyma.06G084100 Glycine max
Gohir.A05G047400 Gossypium hirsutum
Gohir.A07G022700 Gossypium hirsutum
Gohir.D05G049300 Gossypium hirsutum
Gohir.D07G026100 Gossypium hirsutum
Gorai.001G027200 Gossypium raimondii
Gorai.009G050600 Gossypium raimondii
GSVIVG01035645001 Vitis vinifera
HanXRQChr08g0236291 Helianthus annuus
Haze_21877 Corylus avellana
Haze_21992 Corylus avellana
Hma1.2p1_0393F.1_g143070 Hydrangea macrophylla
Hma1.2p1_0393F.1_g143080 Hydrangea macrophylla
Hma1.2p1_0393F.1_g143090 Hydrangea macrophylla
Hma1.2p1_1884F.1_g306470 Hydrangea macrophylla
Hma1.2p1_1884F.1_g306480 Hydrangea macrophylla
HPP92_005269 Vanilla planifolia
Hund19525 Selenicereus undatus
Lalb_Chr08g0243151 Lupinus albus
Lj1g0000494 Lotus japonicus
Lj1g0015489 Lotus japonicus
Lj1g0022106 Lotus japonicus
Lj1g0026118 Lotus japonicus
Lj7A704G80 Lonicera japonica
Lj7A704G81 Lonicera japonica
Lj8C588T0 Lonicera japonica
LjContig00226g0022694 Lotus japonicus
LjContig00518g0000858 Lotus japonicus
Lsat_1_v5_gn_5_33600 Lactuca sativa
Manes.16G072000 Manihot esculenta
Mapoly0027s0036 Marchantia polymorpha
MBI04_g05261_MAGBIO Magnolia biondii
MCO11G337 Micromonas commoda
MD08G1115600 Malus domestica
MD15G1095400 Malus domestica
Medtr3g110160 Medicago truncatula
MELO3C011150.2 Cucumis melo
Migut.A00220 Erythranthe guttata
MSTRG.11705 Avicennia marina
Nitab4.5_0000513g0060 Nicotiana tabacum
Nitab4.5_0010908g0010 Nicotiana tabacum
Nn2g11666 Nelumbo nucifera
Oeu036363.2 Olea europaea
Os02g0276500 Oryza sativa ssp. japonica
Peaxi162Scf00822g00210 Petunia axillaris
PGR044G1364 Punica granatum
PGSC0003DMG400029051 Solanum tuberosum
Phvul.009G108200 Phaseolus vulgaris
Potri.006G240100 Populus trichocarpa
Potri.018G040200 Populus trichocarpa
Pp3c20_5100 Physcomitrium patens
Pp3c7_470 Physcomitrium patens
Prupe.1G450300 Prunus persica
Psat5g022320 Pisum sativum
PSO210G0275 Papaver somniferum
PSO210G3865 Papaver somniferum
QL12p029391 Quercus lobata
RcHm_v2.0_Chr6g0306001 Rosa chinensis
Rhsim02G0179400 Rhododendron simsii
Sabra18G0040100 Salix brachista
Sabra18G0041600 Salix brachista
Sabra18G0041700 Salix brachista
SalBow4G1479 Salvia bowleyana
Sc23g0005290 Simmondsia chinensis
Sed0007027 Sechium edule
SEGI_07805 Sequoiadendron giganteum
SEGI_29042 Sequoiadendron giganteum
SEGI_31241 Sequoiadendron giganteum
SGA_v2.0_scaffold103G29944 Striga asiatica
SMO351G0603 Selaginella moellendorffii
Solyc08g068570.4 Solanum lycopersicum
Sopen08g022330 Solanum pennellii
Sp7g30530 Schrenkiella parvula
TAR624G0168 Trochodendron aralioides
THA.LOC104803808 Tarenaya hassleriana
Thecc.09G042800 Theobroma cacao
Thhalv10025006m.g Eutrema salsugineum
TPR.G33960 Trifolium pratense
TWI34G0390 Tripterygium wilfordii
unitig_32.g11070 Utricularia gibba
vmacro11066 Vaccinium macrocarpon
VMungo1309G1003 Vigna mungo
Zm00001eb237270 Zea mays

User provided reference genes

Program Settings