Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p27760 Brassica napus
Aa31LG3G5920 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.1825 Anthoceros agrestis
Actinidia16194 Actinidia chinensis
Actinidia19384 Actinidia chinensis
Ah.08g218140 Amaranthus hybridus
AL8G24360 Arabidopsis lyrata
Aqoxy5G03589 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.11HRG0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.86E75A Arachis hypogaea
AT5G50310 Arabidopsis thaliana
Atru.chr9.1005 Acer truncatum
AUR62001274 Chenopodium quinoa
AUR62025732 Chenopodium quinoa
BcaB01g02903 Brassica carinata
BcaC01g04819 Brassica carinata
BcaC01g04820 Brassica carinata
BolC3t15670H Brassica oleracea
BraA03t11987Z Brassica rapa
C03p33480 Brassica napus
CAN.G352.12 Capsicum annuum
CAN.G352.5 Capsicum annuum
CANSAT80G2324 Cannabis sativa
CARHR258240 Cardamine hirsuta
Carub.0008s1035 Capsella rubella
Ca_16092_v3 Cicer arietinum L.
CBR_g40809 Chara braunii
CBR_g51513 Chara braunii
Cc04_g10470 Coffea canephora
CDE02G1357 Ceratophyllum demersum
Cfa018895 Carpinus fangiana
Ciclev10019136m.g Citrus clementina
CiPaw.11G012400 Carya illinoinensis
ClCG06G017670 Citrullus lanatus
COL.COLO4_09264 Corchorus olitorius
Cpa.g.sc52.36 Carica papaya
Cpa.g.sc52.37 Carica papaya
Cre04.g217938 Chlamydomonas reinhardtii
Cre09.g398200 Chlamydomonas reinhardtii
CsaV3_1G000790 Cucumis sativus L.
CSS0020432 Camellia sinensis var. sinensis
CSS0020618 Camellia sinensis var. sinensis
CSS0025438 Camellia sinensis var. sinensis
DCAR_016415 Daucus carota
Dinv11108 Davidia involucrata
Duzib205G0739 Durio zibethinus
ECA232G2312 Erigeron canadensis
EL10Ac7g18070 Beta vulgaris
Eucgr.B00150 Eucalyptus grandis
Eucgr.B00154 Eucalyptus grandis
Eucgr.L01339 Eucalyptus grandis
FAN04G2720 Fragaria x ananassa
FAN08G2537 Fragaria x ananassa
FAN13G0064 Fragaria x ananassa
FAN18G2536 Fragaria x ananassa
FvH4_5g07300 Fragaria vesca
Glyma.04G192600 Glycine max
Glyma.06G173200 Glycine max
Gohir.A12G188000 Gossypium hirsutum
Gohir.D12G190800 Gossypium hirsutum
Gorai.008G204700 Gossypium raimondii
GSVIVG01007548001 Vitis vinifera
HanXRQChr09g0272861 Helianthus annuus
Haze_07279 Corylus avellana
Hma1.2p1_0941F.1_g239720 Hydrangea macrophylla
Hma1.2p1_3384F.1_g335740 Hydrangea macrophylla
HPP92_004584 Vanilla planifolia
HPP92_004591 Vanilla planifolia
Hund05630 Selenicereus undatus
Hund05643 Selenicereus undatus
Lalb_Chr11g0069731 Lupinus albus
Lj1g0016804 Lotus japonicus
Lj9A475G62 Lonicera japonica
Lj9A475G63 Lonicera japonica
Lsat_1_v5_gn_2_63001 Lactuca sativa
Lsat_1_v5_gn_4_78900 Lactuca sativa
Lsat_1_v5_gn_9_521 Lactuca sativa
Manes.06G114900 Manihot esculenta
Mapoly0001s0540 Marchantia polymorpha
MBI06_g16660_MAGBIO Magnolia biondii
MBI06_g32519_MAGBIO Magnolia biondii
MCO16G658 Micromonas commoda
MD06G1157400 Malus domestica
MD14G1164000 Malus domestica
Medtr1g107265 Medicago truncatula
MELO3C026231.2 Cucumis melo
Migut.I00257 Erythranthe guttata
Nitab4.5_0003282g0130 Nicotiana tabacum
Nitab4.5_0010042g0030 Nicotiana tabacum
Nn4g22465 Nelumbo nucifera
Oeu011576.1 Olea europaea
Os04g0483600 Oryza sativa ssp. japonica
Peaxi162Scf00089g00716 Petunia axillaris
Peaxi162Scf00089g00721 Petunia axillaris
PGR083G1269 Punica granatum
PGSC0003DMG400015238 Solanum tuberosum
Phvul.009G169100 Phaseolus vulgaris
Potri.015G090100 Populus trichocarpa
Pp3c16_5780 Physcomitrium patens
PRCOL_00006105 Prasinoderma coloniale
Prupe.5G157400 Prunus persica
Psat6g217880 Pisum sativum
PSO063G0990 Papaver somniferum
PSO782G4848 Papaver somniferum
QL04p021669 Quercus lobata
QL10p005311 Quercus lobata
RcHm_v2.0_Chr6g0266051 Rosa chinensis
RcHm_v2.0_Chr7g0191331 Rosa chinensis
RcHm_v2.0_Chr7g0231611 Rosa chinensis
Rhsim08G0184700 Rhododendron simsii
Sabra15G0112300 Salix brachista
SalBow4G2023 Salvia bowleyana
Sc22g0004050 Simmondsia chinensis
Sed0013046 Sechium edule
SEGI_14104 Sequoiadendron giganteum
SEGI_14135 Sequoiadendron giganteum
SEGI_22253 Sequoiadendron giganteum
SGA_v2.0_scaffold102G29851 Striga asiatica
SMO001G0008 Selaginella moellendorffii
SMO024G0003 Selaginella moellendorffii
SMO089G0014 Selaginella moellendorffii
SMO089G0017 Selaginella moellendorffii
SMO200G0038 Selaginella moellendorffii
SMO200G0119 Selaginella moellendorffii
SMO200G0133 Selaginella moellendorffii
SMO200G0165 Selaginella moellendorffii
SMO200G0172 Selaginella moellendorffii
SMO200G0233 Selaginella moellendorffii
SMO200G0253 Selaginella moellendorffii
SMO339G0058 Selaginella moellendorffii
Solyc03g111390.4 Solanum lycopersicum
Sopen03g030520 Solanum pennellii
Sp6g12390 Schrenkiella parvula
TAR374G1436 Trochodendron aralioides
THA.LOC104825004 Tarenaya hassleriana
Thecc.03G122400 Theobroma cacao
Thhalv10012907m.g Eutrema salsugineum
TPR.G3295 Trifolium pratense
TWI39G1189 Tripterygium wilfordii
unitig_899.g15425 Utricularia gibba
vmacro19243 Vaccinium macrocarpon
VMungo1309G2118 Vigna mungo
Zm00001eb079290 Zea mays

User provided reference genes

Program Settings