Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p51350 Brassica napus
Aa31LG10G13380 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.3041__3042 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_117.3082 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_117.611 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.1778 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.2643 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.4866 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.4947 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.5465 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.1994 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.2434 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.3512 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.988 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.1230 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.595 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.647 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.723 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.2564 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.682 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.683 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.684 Anthoceros agrestis
Ah.01g004630 Amaranthus hybridus
AL5G40590 Arabidopsis lyrata
Aqoxy4G00177 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.L8S1IT Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.W6YWPQ Arachis hypogaea
AT3G58800 Arabidopsis thaliana
ATR0737G056 Amborella trichopoda
Atru.chr11.1755 Acer truncatum
AUR62028463 Chenopodium quinoa
AUR62042721 Chenopodium quinoa
BcaC07g40228 Brassica carinata
BcaC07g40297 Brassica carinata
BolC8t51012H Brassica oleracea
BraA09t40576Z Brassica rapa
C08p34130 Brassica napus
CAN.G1191.5 Capsicum annuum
CAN.G585.55 Capsicum annuum
CANSAT64G0352 Cannabis sativa
CARHR169190 Cardamine hirsuta
Carub.0005s2558 Capsella rubella
Ca_06288_v3 Cicer arietinum L.
Cc05_g09280 Coffea canephora
Cfa022915 Carpinus fangiana
Ciclev10031926m.g Citrus clementina
CiPaw.04G135600 Carya illinoinensis
ClCG02G018370 Citrullus lanatus
COL.COLO4_33735 Corchorus olitorius
COL.COLO4_33736 Corchorus olitorius
Cpa.g.sc50.76 Carica papaya
Cre04.g231712 Chlamydomonas reinhardtii
Cre04.g231810 Chlamydomonas reinhardtii
Cre16.g692650 Chlamydomonas reinhardtii
CsaV3_6G015800 Cucumis sativus L.
CSS0023426 Camellia sinensis var. sinensis
CSS0024030 Camellia sinensis var. sinensis
DCAR_009793 Daucus carota
Dinv32183 Davidia involucrata
Duzib187G1515 Durio zibethinus
ECA233G0136 Erigeron canadensis
EL10Ac6g14080 Beta vulgaris
Eucgr.K01197 Eucalyptus grandis
FAN02G4296 Fragaria x ananassa
FAN05G0697 Fragaria x ananassa
FAN14G2921 Fragaria x ananassa
FvH4_6g38090 Fragaria vesca
Glyma.02G287500 Glycine max
Glyma.14G027500 Glycine max
Gohir.A05G378200 Gossypium hirsutum
Gohir.A05G378300 Gossypium hirsutum
Gohir.D04G037200 Gossypium hirsutum
Gohir.D04G037301 Gossypium hirsutum
Gorai.012G042000 Gossypium raimondii
Gorai.012G042100 Gossypium raimondii
GSVIVG01000796001 Vitis vinifera
HanXRQChr12g0369651 Helianthus annuus
HanXRQChr12g0369671 Helianthus annuus
HanXRQChr17g0539561 Helianthus annuus
Haze_13488 Corylus avellana
Hma1.2p1_0036F.1_g023590 Hydrangea macrophylla
HPP92_007777 Vanilla planifolia
HPP92_007800 Vanilla planifolia
Hund04227 Selenicereus undatus
Lalb_Chr04g0248721 Lupinus albus
Lj1P624T16 Lonicera japonica
LjContig00310g0013825 Lotus japonicus
Lsat_1_v5_gn_8_32101 Lactuca sativa
Manes.01G128400 Manihot esculenta
Mapoly0101s0004 Marchantia polymorpha
MBI07_g30205_MAGBIO Magnolia biondii
MCO16G314 Micromonas commoda
MD09G1154100 Malus domestica
MD17G1140700 Malus domestica
Medtr5g091790 Medicago truncatula
MELO3C019690.2 Cucumis melo
Migut.M00515 Erythranthe guttata
MSTRG.15054 Avicennia marina
Nitab4.5_0001402g0040 Nicotiana tabacum
Nitab4.5_0001675g0010 Nicotiana tabacum
Nitab4.5_0002027g0150 Nicotiana tabacum
Nitab4.5_0013539g0010 Nicotiana tabacum
Nn3g20966 Nelumbo nucifera
Oeu006146.1 Olea europaea
Os01g0748200 Oryza sativa ssp. japonica
Os02g0230200 Oryza sativa ssp. japonica
Peaxi162Scf00035g00313 Petunia axillaris
Peaxi162Scf00154g00511 Petunia axillaris
PGR142G4033 Punica granatum
PGSC0003DMG400017296 Solanum tuberosum
Phvul.008G190800 Phaseolus vulgaris
Potri.002G168500 Populus trichocarpa
Pp3c1_7220 Physcomitrium patens
Pp3c3_20150 Physcomitrium patens
Prupe.3G170900 Prunus persica
Psat2g014680 Pisum sativum
PSO541G3070 Papaver somniferum
PSO675G1896 Papaver somniferum
QL08p043914 Quercus lobata
RcHm_v2.0_Chr2g0151151 Rosa chinensis
Rhsim06G0118500 Rhododendron simsii
Sabra02G0143400 Salix brachista
SalBow8G4073 Salvia bowleyana
Sc04g0008260 Simmondsia chinensis
Sed0016784 Sechium edule
SEGI_33032 Sequoiadendron giganteum
SGA_v2.0_scaffold130G34359 Striga asiatica
SHI07041 Sapria himalayana
SMO143G0231 Selaginella moellendorffii
SMO304G0008 Selaginella moellendorffii
SMO356G0525 Selaginella moellendorffii
Solyc07g055940.3 Solanum lycopersicum
Sopen07g029300 Solanum pennellii
Sp5g04040 Schrenkiella parvula
TAR624G0522 Trochodendron aralioides
THA.LOC104803188 Tarenaya hassleriana
Thecc.01G160700 Theobroma cacao
Thhalv10006079m.g Eutrema salsugineum
TPR.G12682 Trifolium pratense
unitig_747.g21613 Utricularia gibba
VMungo0647G0660 Vigna mungo
Zm00001eb153130 Zea mays
Zm00001eb204700 Zea mays

User provided reference genes

Program Settings