Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p32420 Brassica napus
Aa31LG8G4260 Aethionema arabicum
Actinidia18497 Actinidia chinensis
Actinidia22750 Actinidia chinensis
Actinidia31594 Actinidia chinensis
Ah.07g203800 Amaranthus hybridus
AL3G29490 Arabidopsis lyrata
AL3G30390 Arabidopsis lyrata
Aqoxy2G02567 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.68EF5E Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WSVI3W Arachis hypogaea
AT3G17340 Arabidopsis thaliana
ATR0049G027 Amborella trichopoda
ATR0457G001 Amborella trichopoda
ATR0605G314 Amborella trichopoda
ATR0757G088 Amborella trichopoda
ATR0796G315 Amborella trichopoda
ATR0820G007 Amborella trichopoda
Atru.chr4.3122 Acer truncatum
AUR62002576 Chenopodium quinoa
AUR62029998 Chenopodium quinoa
BcaB06g25819 Brassica carinata
BcaC05g28796 Brassica carinata
BolC5t33645H Brassica oleracea
BraA05t22069Z Brassica rapa
C05p49050 Brassica napus
CAN.G14.34 Capsicum annuum
CANSAT78G1118 Cannabis sativa
CARHR092650 Cardamine hirsuta
CARHR092660 Cardamine hirsuta
Carub.0003s1705 Capsella rubella
Ca_21388_v3 Cicer arietinum L.
Cc03_g00330 Coffea canephora
CDE02G0960 Ceratophyllum demersum
CDE09G0452 Ceratophyllum demersum
CDE09G0536 Ceratophyllum demersum
Cfa015712 Carpinus fangiana
Ciclev10004217m.g Citrus clementina
CiPaw.01G131300 Carya illinoinensis
ClCG06G004280 Citrullus lanatus
COL.COLO4_34539 Corchorus olitorius
Cpa.g.sc146.46 Carica papaya
CsaV3_6G000130 Cucumis sativus L.
CSS0004853 Camellia sinensis var. sinensis
CSS0017624 Camellia sinensis var. sinensis
CSS0028497 Camellia sinensis var. sinensis
CSS0040584 Camellia sinensis var. sinensis
DCAR_002539 Daucus carota
Dinv29532 Davidia involucrata
Duzib151G1192 Durio zibethinus
ECA233G2380 Erigeron canadensis
EL10Ac3g06277 Beta vulgaris
Eucgr.H04107 Eucalyptus grandis
FAN07G1807 Fragaria x ananassa
FAN17G0175 Fragaria x ananassa
FvH4_4g20840 Fragaria vesca
FvH4_4g21110 Fragaria vesca
Glyma.07G233500 Glycine max
Glyma.17G038500 Glycine max
Gohir.A02G057201 Gossypium hirsutum
Gohir.D02G063000 Gossypium hirsutum
Gorai.005G070900 Gossypium raimondii
GSVIVG01017598001 Vitis vinifera
GSVIVG01017599001 Vitis vinifera
GSVIVG01017600001 Vitis vinifera
GSVIVG01017664001 Vitis vinifera
GSVIVG01034907001 Vitis vinifera
HanXRQChr09g0251541 Helianthus annuus
Haze_00801 Corylus avellana
Hma1.2p1_0013F.1_g008000 Hydrangea macrophylla
Hma1.2p1_0079F.1_g041380 Hydrangea macrophylla
Lalb_Chr07g0181831 Lupinus albus
Lj3A839G57 Lonicera japonica
Lj4g0022536 Lotus japonicus
Lsat_1_v5_gn_6_69380 Lactuca sativa
Manes.15G003700 Manihot esculenta
Mapoly0002s0222 Marchantia polymorpha
Mapoly0011s0083 Marchantia polymorpha
MBI05_g29537_MAGBIO Magnolia biondii
MBI18_g28901_MAGBIO Magnolia biondii
MCO02G049 Micromonas commoda
MCO08G280 Micromonas commoda
MD15G1386700 Malus domestica
MD16G1139700 Malus domestica
Medtr4g123670 Medicago truncatula
Medtr4g123690 Medicago truncatula
MELO3C021240.2 Cucumis melo
Nitab4.5_0000169g0140 Nicotiana tabacum
Nitab4.5_0000992g0090 Nicotiana tabacum
Nn3g21868 Nelumbo nucifera
Oeu020287.1 Olea europaea
Os11g0693900 Oryza sativa ssp. japonica
Os11g0695900 Oryza sativa ssp. japonica
Peaxi162Scf00126g10123 Petunia axillaris
PGR004G2663 Punica granatum
PGSC0003DMG400012034 Solanum tuberosum
Phvul.003G119400 Phaseolus vulgaris
Potri.010G152700 Populus trichocarpa
Pp3c1_32940 Physcomitrium patens
Pp3c1_32943 Physcomitrium patens
Pp3c21_7100 Physcomitrium patens
Pp3c21_7106 Physcomitrium patens
Pp3c27_6680 Physcomitrium patens
PRCOL_00002040 Prasinoderma coloniale
Prupe.1G109100 Prunus persica
Psat0ss1196g0600 Pisum sativum
PSO210G1072 Papaver somniferum
QL06p013696 Quercus lobata
RcHm_v2.0_Chr4g0426661 Rosa chinensis
Rhsim04G0246500 Rhododendron simsii
Sabra10G0117500 Salix brachista
Sed0008409 Sechium edule
SEGI_08042 Sequoiadendron giganteum
SEGI_24323 Sequoiadendron giganteum
SEGI_25654 Sequoiadendron giganteum
SEGI_33872 Sequoiadendron giganteum
SMO200G0212 Selaginella moellendorffii
Solyc01g057520.4 Solanum lycopersicum
Sopen01g022220 Solanum pennellii
Sp3g15510 Schrenkiella parvula
TAR362G0426 Trochodendron aralioides
Thecc.04G309800 Theobroma cacao
Thhalv10019950m.g Eutrema salsugineum
TPR.G12648 Trifolium pratense
TPR.G13833 Trifolium pratense
TPR.G15154 Trifolium pratense
TPR.G21809 Trifolium pratense
TPR.G35281 Trifolium pratense
TPR.G40673 Trifolium pratense
TPR.G8357 Trifolium pratense
TWI09G0537 Tripterygium wilfordii
vmacro07993 Vaccinium macrocarpon
VMungo1215G2609 Vigna mungo
Zm00001eb026970 Zea mays
Zm00001eb026980 Zea mays
Zm00001eb082350 Zea mays
Zm00001eb082360 Zea mays
Zm00001eb164790 Zea mays
Zm00001eb183920 Zea mays
Zm00001eb187550 Zea mays
Zm00001eb304680 Zea mays
Zm00001eb383150 Zea mays
Zm00001eb385420 Zea mays

User provided reference genes

Program Settings