Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p13220 Brassica napus
A10p14080 Brassica napus
Aa31LG3G12580 Aethionema arabicum
Aa31LG3G12620 Aethionema arabicum
Aa31LG3G12690 Aethionema arabicum
Aa31sc2040G10 Aethionema arabicum
Actinidia25279 Actinidia chinensis
Actinidia39748 Actinidia chinensis
Ah.15g091540 Amaranthus hybridus
AL8G32570 Arabidopsis lyrata
Aqoxy4G01943 Aquilegia oxysepala
Aqoxy4G01946 Aquilegia oxysepala
Aqoxy4G01951 Aquilegia oxysepala
Aqoxy7G03926 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.CWN4E9 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T94LMP Arachis hypogaea
AT5G56740 Arabidopsis thaliana
ATR0705G179 Amborella trichopoda
Atru.chr7.1522 Acer truncatum
AUR62008827 Chenopodium quinoa
AUR62025414 Chenopodium quinoa
BcaB01g04417 Brassica carinata
BcaB08g36064 Brassica carinata
BcaC01g06444 Brassica carinata
BcaC04g20057 Brassica carinata
BolC3t13987H Brassica oleracea
BolC9t57681H Brassica oleracea
BraA03t10634Z Brassica rapa
BraA10t43499Z Brassica rapa
C03p15490 Brassica napus
C09p48310 Brassica napus
CAN.G142.7 Capsicum annuum
CANSAT64G1758 Cannabis sativa
CARHR270490 Cardamine hirsuta
CARHR271620 Cardamine hirsuta
Carub.0008s1722 Capsella rubella
Ca_05904_v3 Cicer arietinum L.
CBR_g45363 Chara braunii
Cc06_g10960 Coffea canephora
Cc06_g10970 Coffea canephora
CDE09G1011 Ceratophyllum demersum
Cfa003134 Carpinus fangiana
Ciclev10008203m.g Citrus clementina
CiPaw.03G219800 Carya illinoinensis
ClCG11G001870 Citrullus lanatus
COL.COLO4_18242 Corchorus olitorius
Cpa.g.sc32.101 Carica papaya
Cre03.g186500 Chlamydomonas reinhardtii
CsaV3_2G001600 Cucumis sativus L.
CSS0004577 Camellia sinensis var. sinensis
CSS0007070 Camellia sinensis var. sinensis
DCAR_012006 Daucus carota
Dinv36732 Davidia involucrata
Duzib168G2227 Durio zibethinus
ECA234G1346 Erigeron canadensis
EL10Ac7g17721 Beta vulgaris
EL10Ac7g17723 Beta vulgaris
Eucgr.C03688 Eucalyptus grandis
FAN19G0312 Fragaria x ananassa
FAN23G1873 Fragaria x ananassa
FAN26G0700 Fragaria x ananassa
FAN26G2354 Fragaria x ananassa
FvH4_1g06810 Fragaria vesca
Glyma.02G250900 Glycine max
Glyma.14G065800 Glycine max
Gohir.A06G070500 Gossypium hirsutum
Gohir.D06G069100 Gossypium hirsutum
Gorai.010G080700 Gossypium raimondii
GSVIVG01015248001 Vitis vinifera
GSVIVG01027373001 Vitis vinifera
GSVIVG01038419001 Vitis vinifera
HanXRQChr12g0355321 Helianthus annuus
Haze_25869 Corylus avellana
Haze_25870 Corylus avellana
HPP92_009085 Vanilla planifolia
Hund05510 Selenicereus undatus
Lalb_Chr15g0084501 Lupinus albus
Lalb_Chr18g0053011 Lupinus albus
Lj7C671G8 Lonicera japonica
LjContig00141g0021499 Lotus japonicus
Lsat_1_v5_gn_5_146040 Lactuca sativa
Manes.16G105100 Manihot esculenta
Mapoly0079s0005 Marchantia polymorpha
MBI04_g06995_MAGBIO Magnolia biondii
MBI14_g43979_MAGBIO Magnolia biondii
MCO15G657 Micromonas commoda
MD02G1072700 Malus domestica
MD15G1202500 Malus domestica
Medtr5g080780 Medicago truncatula
MELO3C004615.2 Cucumis melo
Migut.J00438 Erythranthe guttata
MSTRG.19532 Avicennia marina
Nitab4.5_0001492g0020 Nicotiana tabacum
Nitab4.5_0004011g0060 Nicotiana tabacum
Nn6g35397 Nelumbo nucifera
Oeu052126.1 Olea europaea
Os09g0347800 Oryza sativa ssp. japonica
Peaxi162Scf01468g00004 Petunia axillaris
PGR102G3363 Punica granatum
PGSC0003DMG400033362 Solanum tuberosum
Phvul.008G230500 Phaseolus vulgaris
Potri.013G068200 Populus trichocarpa
Pp3c15_19200 Physcomitrium patens
PRCOL_00004982 Prasinoderma coloniale
Prupe.7G214700 Prunus persica
Psat2g038680 Pisum sativum
PSO210G1233 Papaver somniferum
PSO210G3043 Papaver somniferum
QL02p063470 Quercus lobata
RcHm_v2.0_Chr2g0092581 Rosa chinensis
RcHm_v2.0_Chr2g0093921 Rosa chinensis
RcHm_v2.0_Chr2g0093931 Rosa chinensis
Rhsim05G0031400 Rhododendron simsii
Sabra13G0059500 Salix brachista
Sc08g0008210 Simmondsia chinensis
Sed0020374 Sechium edule
SEGI_34717 Sequoiadendron giganteum
SGA_v2.0_scaffold10G05199 Striga asiatica
SGA_v2.0_scaffold194G40752 Striga asiatica
SGA_v2.0_scaffold62G21576 Striga asiatica
SHI02790 Sapria himalayana
SMO244G0078 Selaginella moellendorffii
SMO281G0026 Selaginella moellendorffii
Solyc02g068580.1 Solanum lycopersicum
Sopen02g017740 Solanum pennellii
Sp6g18490 Schrenkiella parvula
TAR624G1381 Trochodendron aralioides
THA.LOC104811733 Tarenaya hassleriana
Thecc.09G094300 Theobroma cacao
Thhalv10013465m.g Eutrema salsugineum
TPR.G25848 Trifolium pratense
TWI34G0876 Tripterygium wilfordii
TWI63G0491 Tripterygium wilfordii
unitig_26.g9161 Utricularia gibba
vmacro10822 Vaccinium macrocarpon
VMungo0647G0234 Vigna mungo
Zm00001eb054310 Zea mays
Zm00001eb171070 Zea mays
Zm00001eb301910 Zea mays
Zm00001eb301930 Zea mays
Zm00001eb310550 Zea mays
Zm00001eb382850 Zea mays
Zm00001eb383990 Zea mays

User provided reference genes

Program Settings