Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p29600 Brassica napus
Aa31LG11G5120 Aethionema arabicum
Aa31LG9G10310 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.248 Anthoceros agrestis
Actinidia02093 Actinidia chinensis
Actinidia14462 Actinidia chinensis
Ah.02g116220 Amaranthus hybridus
Ah.12g058260 Amaranthus hybridus
AL6G47090 Arabidopsis lyrata
Aqoxy7G00654 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.VS5X7Y Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YRMJ3W Arachis hypogaea
AT4G12230 Arabidopsis thaliana
ATR0757G031 Amborella trichopoda
Atru.chr9.1428 Acer truncatum
AUR62010507 Chenopodium quinoa
AUR62017394 Chenopodium quinoa
BcaB01g02654 Brassica carinata
BcaC01g04601 Brassica carinata
BolC3t15896H Brassica oleracea
BraA03t12155Z Brassica rapa
C03p35880 Brassica napus
CAN.G630.87 Capsicum annuum
CANSAT80G2034 Cannabis sativa
CARHR254020 Cardamine hirsuta
Carub.0006s3135 Capsella rubella
Ca_12278_v3 Cicer arietinum L.
Cc08_g13200 Coffea canephora
Cc08_g13210 Coffea canephora
CDE09G1063 Ceratophyllum demersum
CDE11G0205 Ceratophyllum demersum
CDE11G1060 Ceratophyllum demersum
Cfa012803 Carpinus fangiana
Ciclev10020454m.g Citrus clementina
CiPaw.11G147800 Carya illinoinensis
CiPaw.12G105300 Carya illinoinensis
ClCG01G003660 Citrullus lanatus
COL.COLO4_31983 Corchorus olitorius
Cpa.g.sc29.95 Carica papaya
CsaV3_5G003780 Cucumis sativus L.
CSS0004035 Camellia sinensis var. sinensis
DCAR_006803 Daucus carota
Dinv21573 Davidia involucrata
Dinv37766 Davidia involucrata
Dinv39082 Davidia involucrata
Duzib084G0213 Durio zibethinus
Duzib205G1434 Durio zibethinus
ECA233G3282 Erigeron canadensis
EL10Ac5g12610 Beta vulgaris
Eucgr.C02046 Eucalyptus grandis
Eucgr.D01991 Eucalyptus grandis
FAN04G0899 Fragaria x ananassa
FAN08G1347 Fragaria x ananassa
FAN13G3324 Fragaria x ananassa
FAN18G3339 Fragaria x ananassa
FvH4_5g00640 Fragaria vesca
Glyma.05G052200 Glycine max
Glyma.05G052500 Glycine max
Glyma.17G134700 Glycine max
Gohir.A03G012000 Gossypium hirsutum
Gohir.A11G020400 Gossypium hirsutum
Gohir.A12G220700 Gossypium hirsutum
Gohir.D03G157800 Gossypium hirsutum
Gohir.D11G020100 Gossypium hirsutum
Gohir.D12G223000 Gossypium hirsutum
Gorai.003G166300 Gossypium raimondii
Gorai.007G021400 Gossypium raimondii
Gorai.008G239300 Gossypium raimondii
GSVIVG01004916001 Vitis vinifera
HanXRQChr02g0046251 Helianthus annuus
HanXRQChr07g0188671 Helianthus annuus
Haze_08610 Corylus avellana
Hma1.2p1_0367F.1_g137040 Hydrangea macrophylla
HPP92_014608 Vanilla planifolia
Hund14648 Selenicereus undatus
Lalb_Chr05g0225431 Lupinus albus
Lj4g0005126 Lotus japonicus
Lj8A255T56 Lonicera japonica
Lsat_1_v5_gn_2_99060 Lactuca sativa
Lsat_1_v5_gn_6_9841 Lactuca sativa
Lsat_1_v5_gn_8_156781 Lactuca sativa
Lsat_1_v5_gn_8_88300 Lactuca sativa
Lsat_1_v5_gn_8_99640 Lactuca sativa
Manes.02G033900 Manihot esculenta
Mapoly0066s0051 Marchantia polymorpha
MBI12_g31646_MAGBIO Magnolia biondii
MD04G1079900 Malus domestica
MD06G1074700 Malus domestica
MD06G1074800 Malus domestica
MD06G1074900 Malus domestica
Medtr4g102260 Medicago truncatula
MELO3C005579.2 Cucumis melo
Migut.A00832 Erythranthe guttata
MSTRG.12063 Avicennia marina
Nitab4.5_0003534g0020 Nicotiana tabacum
Nitab4.5_0007591g0040 Nicotiana tabacum
Nn1g01261 Nelumbo nucifera
Nn4g26373 Nelumbo nucifera
Oeu016513.1 Olea europaea
Oeu022319.3 Olea europaea
Os10g0169800 Oryza sativa ssp. japonica
Peaxi162Scf00271g00021 Petunia axillaris
PGR031G2306 Punica granatum
PGSC0003DMG400003959 Solanum tuberosum
Phvul.003G214500 Phaseolus vulgaris
Potri.001G118000 Populus trichocarpa
Potri.003G114900 Populus trichocarpa
Pp3c6_20320 Physcomitrium patens
Prupe.5G079200 Prunus persica
Psat4g068120 Pisum sativum
PSO478G4449 Papaver somniferum
PSO782G2032 Papaver somniferum
QL12p014915 Quercus lobata
RcHm_v2.0_Chr7g0201621 Rosa chinensis
Rhsim07G0101700 Rhododendron simsii
Sabra01G0090700 Salix brachista
Sabra03G0079600 Salix brachista
SalBow1G6483 Salvia bowleyana
Sc22g0000600 Simmondsia chinensis
Sed0004099 Sechium edule
SEGI_08273 Sequoiadendron giganteum
SEGI_15988 Sequoiadendron giganteum
SEGI_16146 Sequoiadendron giganteum
SEGI_25328 Sequoiadendron giganteum
SGA_v2.0_scaffold120G32820 Striga asiatica
SMO223G0031 Selaginella moellendorffii
Solyc08g079450.3 Solanum lycopersicum
Sopen08g027820 Solanum pennellii
Sp6g05330 Schrenkiella parvula
TAR629G1108 Trochodendron aralioides
TAR636G1323 Trochodendron aralioides
TAR636G3691 Trochodendron aralioides
THA.LOC104813867 Tarenaya hassleriana
Thecc.03G261400 Theobroma cacao
Thhalv10028717m.g Eutrema salsugineum
TPR.G37684 Trifolium pratense
TWI15G0139 Tripterygium wilfordii
TWI15G0397 Tripterygium wilfordii
TWI81G0363 Tripterygium wilfordii
unitig_744.g24320 Utricularia gibba
vmacro14043 Vaccinium macrocarpon
VMungo1215G1740 Vigna mungo
Zm00001eb026990 Zea mays

User provided reference genes

Program Settings