Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p40970 Brassica napus
A06p34430 Brassica napus
Aa31LG3G18150 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.750 Anthoceros agrestis
Actinidia19406 Actinidia chinensis
Actinidia31077 Actinidia chinensis
Ah.08g214580 Amaranthus hybridus
Ah.15g093460 Amaranthus hybridus
AL6G18870 Arabidopsis lyrata
AL6G34730 Arabidopsis lyrata
Aqoxy3G04359 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.CPCZ9R Arachis hypogaea
AT5G08410 Arabidopsis thaliana
AT5G23440 Arabidopsis thaliana
ATR0124G002 Amborella trichopoda
Atru.chr11.6 Acer truncatum
AUR62028426 Chenopodium quinoa
AUR62038497 Chenopodium quinoa
BcaB01g05597 Brassica carinata
BcaB01g05599 Brassica carinata
BolC2t12138H Brassica oleracea
BolC3t12965H Brassica oleracea
BraA02t09045Z Brassica rapa
BraA06t26372Z Brassica rapa
C02p60860 Brassica napus
C03p04320 Brassica napus
CAN.G219.47 Capsicum annuum
CANSAT78G0451 Cannabis sativa
CARHR190070 Cardamine hirsuta
CARHR204630 Cardamine hirsuta
Carub.0006s0732 Capsella rubella
Carub.0006s2124 Capsella rubella
Ca_04131_v3 Cicer arietinum L.
CBR_g32063 Chara braunii
Cc02_g28180 Coffea canephora
CDE05G2330 Ceratophyllum demersum
CDE11G0284 Ceratophyllum demersum
CDE12G0350 Ceratophyllum demersum
Cfa018663 Carpinus fangiana
Ciclev10017019m.g Citrus clementina
CiPaw.16G000100 Carya illinoinensis
ClCG11G012840 Citrullus lanatus
Cpa.g.sc248.7 Carica papaya
Cre16.g687294 Chlamydomonas reinhardtii
CsaV3_5G029240 Cucumis sativus L.
CSS0022575 Camellia sinensis var. sinensis
DCAR_006352 Daucus carota
Dinv09331 Davidia involucrata
Dinv43423 Davidia involucrata
Duzib132G0443 Durio zibethinus
Duzib248G0326 Durio zibethinus
ECA234G0076 Erigeron canadensis
EL10Ac1g01282 Beta vulgaris
Eucgr.G02623 Eucalyptus grandis
Eucgr.J00323 Eucalyptus grandis
FAN07G0133 Fragaria x ananassa
FAN07G0378 Fragaria x ananassa
FAN17G1203 Fragaria x ananassa
FvH4_4g37381 Fragaria vesca
Glyma.05G000300 Glycine max
Glyma.19G000200 Glycine max
Gohir.A03G168400 Gossypium hirsutum
Gohir.A12G011400 Gossypium hirsutum
Gohir.D02G191500 Gossypium hirsutum
Gohir.D12G011800 Gossypium hirsutum
Gorai.005G214300 Gossypium raimondii
Gorai.008G011800 Gossypium raimondii
HanXRQChr17g0563021 Helianthus annuus
Hma1.2p1_2160F.1_g315560 Hydrangea macrophylla
HPP92_004266 Vanilla planifolia
Hund08591 Selenicereus undatus
Lj2g0002318 Lotus japonicus
Lj9P634T19 Lonicera japonica
Lsat_1_v5_gn_4_31381 Lactuca sativa
Lsat_1_v5_gn_6_59760 Lactuca sativa
Manes.14G174500 Manihot esculenta
Manes.16G000200 Manihot esculenta
Manes.16G039900 Manihot esculenta
Manes.16G040000 Manihot esculenta
Mapoly0005s0050 Marchantia polymorpha
MBI03_g11910_MAGBIO Magnolia biondii
MCO09G175 Micromonas commoda
MD10G1109200 Malus domestica
MD13G1000200 Malus domestica
MD16G1005600 Malus domestica
Medtr6g004100 Medicago truncatula
Migut.N01609 Erythranthe guttata
MSTRG.28061 Avicennia marina
MSTRG.5030 Avicennia marina
Nitab4.5_0000707g0260 Nicotiana tabacum
Nitab4.5_0006228g0010 Nicotiana tabacum
Nn7g38127 Nelumbo nucifera
Oeu006561.1 Olea europaea
Oeu049005.1 Olea europaea
Oeu049492.1 Olea europaea
Os02g0638300 Oryza sativa ssp. japonica
Os04g0528800 Oryza sativa ssp. japonica
Peaxi162Scf00019g00006 Petunia axillaris
PGR044G1862 Punica granatum
PGR142G2143 Punica granatum
PGSC0003DMG400006858 Solanum tuberosum
Phvul.004G000400 Phaseolus vulgaris
Potri.008G002200 Populus trichocarpa
Potri.010G255500 Populus trichocarpa
Pp3c26_13800 Physcomitrium patens
Pp3c26_13840 Physcomitrium patens
Pp3c4_29510 Physcomitrium patens
Pp3c4_31020 Physcomitrium patens
Prupe.1G352600 Prunus persica
Psat1g053320 Pisum sativum
PSO063G1455 Papaver somniferum
PSO782G1364 Papaver somniferum
QL01p000104 Quercus lobata
RcHm_v2.0_Chr4g0447301 Rosa chinensis
Rhsim07G0056900 Rhododendron simsii
RhsimUnG0144200 Rhododendron simsii
Sabra08G0000100 Salix brachista
Sabra10G0198900 Salix brachista
SalBow6G0941 Salvia bowleyana
Sc06g0007700 Simmondsia chinensis
Sed0001576 Sechium edule
Sed0008094 Sechium edule
SEGI_30396 Sequoiadendron giganteum
SGA_v2.0_scaffold24G10667 Striga asiatica
SMO367G0363 Selaginella moellendorffii
Solyc01g087520.3 Solanum lycopersicum
Sopen01g034490 Solanum pennellii
Sp2g23720 Schrenkiella parvula
Sp6g34530 Schrenkiella parvula
TAR376G0259 Trochodendron aralioides
THA.LOC104800596 Tarenaya hassleriana
THA.LOC104819368 Tarenaya hassleriana
Thecc.02G151000 Theobroma cacao
Thhalv10005472m.g Eutrema salsugineum
Thhalv10014787m.g Eutrema salsugineum
TPR.G25213 Trifolium pratense
TWI77G0922 Tripterygium wilfordii
unitig_699.g19828 Utricularia gibba
vmacro13683 Vaccinium macrocarpon
VMungo0464G1452 Vigna mungo
Zm00001eb075910 Zea mays
Zm00001eb185670 Zea mays
Zm00001eb248360 Zea mays

User provided reference genes

Program Settings