Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p31470 Brassica napus
A09p08770 Brassica napus
Aa31LG1G17270 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.1252 Anthoceros agrestis
Actinidia06665 Actinidia chinensis
Ah.12g062320 Amaranthus hybridus
AL8G42090 Arabidopsis lyrata
Aqoxy2G00112 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.A0975M Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MGEL7E Arachis hypogaea
AT5G64670 Arabidopsis thaliana
ATR0681G389 Amborella trichopoda
Atru.chr4.645 Acer truncatum
AUR62037110 Chenopodium quinoa
AUR62042368 Chenopodium quinoa
BcaB02g09811 Brassica carinata
BcaB04g19983 Brassica carinata
BcaC01g02699 Brassica carinata
BcaC04g23299 Brassica carinata
BolC3t18410H Brassica oleracea
BolC9t53904H Brassica oleracea
BraA06t26084Z Brassica rapa
BraA09t36528Z Brassica rapa
C03p61490 Brassica napus
C09p09960 Brassica napus
CAN.G1681.15 Capsicum annuum
CANSAT78G2510 Cannabis sativa
CARHR278650 Cardamine hirsuta
Carub.0008s2547 Capsella rubella
Ca_06746_v3 Cicer arietinum L.
Ca_24797_v3 Cicer arietinum L.
Cc03_g13010 Coffea canephora
CDE04G3439 Ceratophyllum demersum
Cfa002866 Carpinus fangiana
Cfa023704 Carpinus fangiana
Ciclev10026233m.g Citrus clementina
CiPaw.03G124000 Carya illinoinensis
CiPaw.04G084200 Carya illinoinensis
COL.COLO4_33103 Corchorus olitorius
Cpa.g.sc42.91 Carica papaya
Cre11.g476800 Chlamydomonas reinhardtii
CsaV3_5G027610 Cucumis sativus L.
CSS0028117 Camellia sinensis var. sinensis
CSS0042405 Camellia sinensis var. sinensis
DCAR_029930 Daucus carota
Dinv05183 Davidia involucrata
Dinv06137 Davidia involucrata
Dinv09930 Davidia involucrata
Duzib052G0951 Durio zibethinus
ECA248G2357 Erigeron canadensis
EL10As1g23109 Beta vulgaris
Eucgr.I00243 Eucalyptus grandis
FAN11G2409 Fragaria x ananassa
FAN16G1456 Fragaria x ananassa
FAN16G3002 Fragaria x ananassa
FAN21G3369 Fragaria x ananassa
FAN25G0340 Fragaria x ananassa
FvH4_3g30590 Fragaria vesca
Glyma.08G162600 Glycine max
Glyma.15G244400 Glycine max
Glyma.15G264500 Glycine max
Gohir.A04G109416 Gossypium hirsutum
Gohir.D04G148800 Gossypium hirsutum
Gorai.012G135300 Gossypium raimondii
GSVIVG01016205001 Vitis vinifera
HanXRQChr17g0554451 Helianthus annuus
Haze_25184 Corylus avellana
Haze_26805 Corylus avellana
Hma1.2p1_1099F.1_g256840 Hydrangea macrophylla
Hma1.2p1_1099F.1_g256850 Hydrangea macrophylla
Hma1.2p1_1099F.1_g256860 Hydrangea macrophylla
HPP92_011348 Vanilla planifolia
Hund15173 Selenicereus undatus
Lalb_Chr20g0108351 Lupinus albus
Lalb_Chr25g0284201 Lupinus albus
Lalb_Chr25g0284211 Lupinus albus
Lj1g0011811 Lotus japonicus
Lj4A865T28 Lonicera japonica
Lsat_1_v5_gn_5_89980 Lactuca sativa
Manes.12G150400 Manihot esculenta
Mapoly0020s0151 Marchantia polymorpha
Mapoly0177s0003 Marchantia polymorpha
MBI11_g07621_MAGBIO Magnolia biondii
MBI11_g29951_MAGBIO Magnolia biondii
MBI11_g36871_MAGBIO Magnolia biondii
MBI11_g45437_MAGBIO Magnolia biondii
MBI11_g45438_MAGBIO Magnolia biondii
MBI11_g48066_MAGBIO Magnolia biondii
MCO05G392 Micromonas commoda
MD17G1181300 Malus domestica
Medtr1g031890 Medicago truncatula
Medtr1g085490 Medicago truncatula
Medtr4g118060 Medicago truncatula
MELO3C022914.2 Cucumis melo
Migut.H01124 Erythranthe guttata
MSTRG.23423 Avicennia marina
MSTRG.2688 Avicennia marina
Nitab4.5_0002064g0080 Nicotiana tabacum
Nitab4.5_0007636g0020 Nicotiana tabacum
Nn1g06103 Nelumbo nucifera
Oeu028499.1 Olea europaea
Oeu064304.2 Olea europaea
Os08g0310100 Oryza sativa ssp. japonica
Peaxi162Scf00129g00316 Petunia axillaris
PGR119G1388 Punica granatum
PGSC0003DMG400016731 Solanum tuberosum
Phvul.005G016800 Phaseolus vulgaris
Potri.001G324300 Populus trichocarpa
Potri.016G002400 Populus trichocarpa
Pp3c25_6490 Physcomitrium patens
PRCOL_00002014 Prasinoderma coloniale
Prupe.6G163200 Prunus persica
Prupe.8G100400 Prunus persica
Psat6g157720 Pisum sativum
PSO210G3075 Papaver somniferum
PSO238G0014 Papaver somniferum
QL02p010224 Quercus lobata
QL06p051886 Quercus lobata
RcHm_v2.0_Chr5g0056641 Rosa chinensis
Rhsim10G0141500 Rhododendron simsii
Sabra16G0006900 Salix brachista
Sc22g0002320 Simmondsia chinensis
Sed0016851 Sechium edule
SGA_v2.0_scaffold146G36155 Striga asiatica
SGA_v2.0_scaffold76G25165 Striga asiatica
SHI11525 Sapria himalayana
SMO367G0866 Selaginella moellendorffii
Solyc02g081310.3 Solanum lycopersicum
Sopen02g025940 Solanum pennellii
Sp2g27730 Schrenkiella parvula
TAR381G0280 Trochodendron aralioides
TAR628G1127 Trochodendron aralioides
THA.LOC104799448 Tarenaya hassleriana
Thecc.02G155300 Theobroma cacao
Thhalv10004738m.g Eutrema salsugineum
TWI75G0931 Tripterygium wilfordii
TWI79G0070 Tripterygium wilfordii
unitig_27.g25064 Utricularia gibba
unitig_699.g19200 Utricularia gibba
vmacro12445 Vaccinium macrocarpon
vmacro12831 Vaccinium macrocarpon
VMungo0464G1657 Vigna mungo
Zm00001eb129960 Zea mays

User provided reference genes

Program Settings