Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p30530 Brassica napus
Aa31LG1G17980 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.2029 Anthoceros agrestis
Actinidia16523 Actinidia chinensis
Ah.06g191030 Amaranthus hybridus
AL8G41150 Arabidopsis lyrata
Aqoxy5G02419 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.7K8RK5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZN9YLD Arachis hypogaea
AT5G63910 Arabidopsis thaliana
ATR0138G018 Amborella trichopoda
Atru.chr4.988 Acer truncatum
AUR62000514 Chenopodium quinoa
AUR62006858 Chenopodium quinoa
BcaB02g09762 Brassica carinata
BcaC01g02644 Brassica carinata
BolC3t18507H Brassica oleracea
BraA06t26002Z Brassica rapa
C03p62500 Brassica napus
CAN.G1104.7 Capsicum annuum
CANSAT35G0194 Cannabis sativa
CARHR277830 Cardamine hirsuta
Carub.0008s2471 Capsella rubella
Ca_16981_v3 Cicer arietinum L.
CBR_g8546 Chara braunii
CBR_g8549 Chara braunii
CBR_g864 Chara braunii
Cc07_g21020 Coffea canephora
CDE08G1426 Ceratophyllum demersum
CDE08G1664 Ceratophyllum demersum
Cfa021278 Carpinus fangiana
Cfa022134 Carpinus fangiana
Ciclev10000962m.g Citrus clementina
CiPaw.03G118000 Carya illinoinensis
ClCG04G002290 Citrullus lanatus
COL.COLO4_35813 Corchorus olitorius
Cpa.g.sc37.6 Carica papaya
Cpa.g.sc37.7 Carica papaya
Cre10.g425200 Chlamydomonas reinhardtii
CsaV3_4G030380 Cucumis sativus L.
CSS0004303 Camellia sinensis var. sinensis
CSS0007937 Camellia sinensis var. sinensis
CSS0025385 Camellia sinensis var. sinensis
CSS0025452 Camellia sinensis var. sinensis
CSS0028284 Camellia sinensis var. sinensis
CSS0034769 Camellia sinensis var. sinensis
CSS0038762 Camellia sinensis var. sinensis
DCAR_000205 Daucus carota
DCAR_019994 Daucus carota
Dinv15529 Davidia involucrata
Dinv24561 Davidia involucrata
Dinv24565 Davidia involucrata
Duzib147G1331 Durio zibethinus
Duzib187G0999 Durio zibethinus
ECA248G0233 Erigeron canadensis
EL10Ac4g09623 Beta vulgaris
Eucgr.I00123 Eucalyptus grandis
FAN19G2916 Fragaria x ananassa
FAN23G2334 Fragaria x ananassa
FAN26G1990 Fragaria x ananassa
FAN28G1250 Fragaria x ananassa
FvH4_1g24860 Fragaria vesca
Glyma.04G210301 Glycine max
Glyma.06G155750 Glycine max
Gohir.A12G085400 Gossypium hirsutum
Gohir.D12G083400 Gossypium hirsutum
Gohir.D12G083401 Gossypium hirsutum
Gorai.008G094500 Gossypium raimondii
GSVIVG01022340001 Vitis vinifera
HanXRQChr01g0017141 Helianthus annuus
Haze_10873 Corylus avellana
Hma1.2p1_0310F.1_g121020 Hydrangea macrophylla
Hma1.2p1_0310F.1_g121040 Hydrangea macrophylla
Hma1.2p1_3117F.1_g332810 Hydrangea macrophylla
HPP92_011629 Vanilla planifolia
Hund07236 Selenicereus undatus
Hund21799 Selenicereus undatus
Lalb_Chr23g0272691 Lupinus albus
Lj4A421T8 Lonicera japonica
Lsat_1_v5_gn_1_78000 Lactuca sativa
Manes.12G159000 Manihot esculenta
Mapoly0032s0088 Marchantia polymorpha
MBI06_g35210_MAGBIO Magnolia biondii
MD15G1135000 Malus domestica
Medtr3g096675 Medicago truncatula
MELO3C008897.2 Cucumis melo
Migut.H00797 Erythranthe guttata
MSTRG.23499 Avicennia marina
Nitab4.5_0000432g0040 Nicotiana tabacum
Nitab4.5_0000954g0020 Nicotiana tabacum
Nitab4.5_0002142g0070 Nicotiana tabacum
Nitab4.5_0004530g0050 Nicotiana tabacum
Nitab4.5_0005379g0060 Nicotiana tabacum
Nitab4.5_0008217g0010 Nicotiana tabacum
Nitab4.5_0008592g0010 Nicotiana tabacum
Nn1g08960 Nelumbo nucifera
Nn5g28436 Nelumbo nucifera
Oeu037874.1 Olea europaea
Oeu039334.1 Olea europaea
Os04g0692800 Oryza sativa ssp. japonica
Peaxi162Scf00151g00811 Petunia axillaris
Peaxi162Scf00151g00815 Petunia axillaris
Peaxi162Scf00151g00817 Petunia axillaris
PGR119G0364 Punica granatum
PGSC0003DMG400045338 Solanum tuberosum
Phvul.009G154600 Phaseolus vulgaris
Potri.007G101600 Populus trichocarpa
Potri.007G101700 Populus trichocarpa
Pp3c3_10560 Physcomitrium patens
PRCOL_00003919 Prasinoderma coloniale
Prupe.4G274700 Prunus persica
Psat5g059680 Pisum sativum
PSO170G0528 Papaver somniferum
QL10p041264 Quercus lobata
QL10p041267 Quercus lobata
QL10p041275 Quercus lobata
RcHm_v2.0_Chr2g0122521 Rosa chinensis
RcHm_v2.0_Chr6g0261231 Rosa chinensis
Rhsim08G0000400 Rhododendron simsii
Sabra07G0083800 Salix brachista
Sabra07G0083900 Salix brachista
Sc09g0002230 Simmondsia chinensis
Sed0025698 Sechium edule
SEGI_22884 Sequoiadendron giganteum
SEGI_35897 Sequoiadendron giganteum
SEGI_37681 Sequoiadendron giganteum
SGA_v2.0_scaffold189G40378 Striga asiatica
SMO119G0327 Selaginella moellendorffii
Solyc12g088020.1 Solanum lycopersicum
Sopen12g030050 Solanum pennellii
Sp2g26980 Schrenkiella parvula
TAR625G0087 Trochodendron aralioides
THA.LOC104818420 Tarenaya hassleriana
THA.LOC104819345 Tarenaya hassleriana
Thecc.01G137300 Theobroma cacao
Thhalv10004131m.g Eutrema salsugineum
TPR.G33580 Trifolium pratense
TWI75G1712 Tripterygium wilfordii
unitig_748.g8002 Utricularia gibba
unitig_748.g8003 Utricularia gibba
vmacro18685 Vaccinium macrocarpon
VMungo1309G1016 Vigna mungo
Zm00001eb434510 Zea mays

User provided reference genes

Program Settings