Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p39410 Brassica napus
Aa31LG11G7560 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.3236 Anthoceros agrestis
Actinidia20684 Actinidia chinensis
Actinidia21565 Actinidia chinensis
AL8G20280 Arabidopsis lyrata
Aqoxy2G00109 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.A7HRCY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DICK3U Arachis hypogaea
AT5G48020 Arabidopsis thaliana
ATR0605G013 Amborella trichopoda
Atru.chr11.2010 Acer truncatum
Atru.chr11.2632 Acer truncatum
Atru.chr13.2215 Acer truncatum
Atru.ctg794.7 Acer truncatum
AUR62009369 Chenopodium quinoa
AUR62023050 Chenopodium quinoa
BcaC06g30830 Brassica carinata
BolC7t44405H Brassica oleracea
BraA06t26856Z Brassica rapa
C07p38860 Brassica napus
CANSAT21G0587 Cannabis sativa
CARHR184290 Cardamine hirsuta
Carub.0008s0757 Capsella rubella
Ca_23856_v3 Cicer arietinum L.
Ca_24079_v3 Cicer arietinum L.
Ca_24082_v3 Cicer arietinum L.
Cc02_g27470 Coffea canephora
CDE04G1667 Ceratophyllum demersum
Cfa010729 Carpinus fangiana
Ciclev10031943m.g Citrus clementina
ClCG10G012540 Citrullus lanatus
COL.COLO4_23903 Corchorus olitorius
Cpa.g.sc234.2 Carica papaya
Cpa.g.sc2760.1 Carica papaya
Cre13.g586400 Chlamydomonas reinhardtii
CsaV3_3G032330 Cucumis sativus L.
CSS0013341 Camellia sinensis var. sinensis
DCAR_029637 Daucus carota
Dinv09380 Davidia involucrata
Duzib268G1126 Durio zibethinus
ECA248G0026 Erigeron canadensis
ECA248G2079 Erigeron canadensis
ECA248G2524 Erigeron canadensis
EL10Ac2g04308 Beta vulgaris
Eucgr.J01253 Eucalyptus grandis
Eucgr.J01254 Eucalyptus grandis
Eucgr.J01256 Eucalyptus grandis
Eucgr.J01257 Eucalyptus grandis
Eucgr.L03705 Eucalyptus grandis
FAN01G1197 Fragaria x ananassa
FAN01G1198 Fragaria x ananassa
FAN03G1002 Fragaria x ananassa
FAN06G0391 Fragaria x ananassa
FAN10G3755 Fragaria x ananassa
FvH4_7g00610 Fragaria vesca
Glyma.12G239400 Glycine max
Gohir.A08G026900 Gossypium hirsutum
Gohir.D08G037700 Gossypium hirsutum
Gorai.004G035700 Gossypium raimondii
GSVIVG01032048001 Vitis vinifera
HanXRQChr01g0017351 Helianthus annuus
HanXRQChr11g0330561 Helianthus annuus
HanXRQChr11g0330581 Helianthus annuus
HanXRQChr11g0330591 Helianthus annuus
HanXRQChr11g0330601 Helianthus annuus
Haze_03242 Corylus avellana
Hma1.2p1_1011F.1_g247500 Hydrangea macrophylla
HPP92_022786 Vanilla planifolia
Hund03675 Selenicereus undatus
Hund03676 Selenicereus undatus
Lalb_Chr03g0033921 Lupinus albus
Lj3g0011351 Lotus japonicus
Lj9A629T99 Lonicera japonica
Lj9C629T1 Lonicera japonica
Lsat_1_v5_gn_1_109141 Lactuca sativa
Lsat_1_v5_gn_1_111020 Lactuca sativa
Lsat_1_v5_gn_1_72821 Lactuca sativa
Manes.10G147800 Manihot esculenta
Mapoly0019s0106 Marchantia polymorpha
MBI04_g14265_MAGBIO Magnolia biondii
MD02G1316300 Malus domestica
MD07G1005600 Malus domestica
Medtr8g036165 Medicago truncatula
MELO3C023957.2 Cucumis melo
Migut.B01343 Erythranthe guttata
MSTRG.20606 Avicennia marina
Nitab4.5_0000050g0030 Nicotiana tabacum
Nitab4.5_0002012g0040 Nicotiana tabacum
Nn7g36086 Nelumbo nucifera
Oeu039102.1 Olea europaea
Oeu039103.1 Olea europaea
Oeu064272.1 Olea europaea
Os02g0717500 Oryza sativa ssp. japonica
Peaxi162Scf00042g00510 Petunia axillaris
Peaxi162Scf00451g00621 Petunia axillaris
PGR044G0372 Punica granatum
Phvul.011G213800 Phaseolus vulgaris
Potri.001G271100 Populus trichocarpa
Pp3c14_26250 Physcomitrium patens
Pp3c17_23530 Physcomitrium patens
Prupe.2G008000 Prunus persica
Prupe.2G008200 Prunus persica
Psat4g195080 Pisum sativum
PSO339G1127 Papaver somniferum
PSO384G1382 Papaver somniferum
QL04p004838 Quercus lobata
QL04p004849 Quercus lobata
QL04p004868 Quercus lobata
QL04p004878 Quercus lobata
RcHm_v2.0_Chr1g0314801 Rosa chinensis
Rhsim01G0131200 Rhododendron simsii
Rhsim06G0016300 Rhododendron simsii
Rhsim09G0135800 Rhododendron simsii
Sabra16G0166500 Salix brachista
SalBow5G3096 Salvia bowleyana
SalBow5G3836 Salvia bowleyana
Sc11g0009350 Simmondsia chinensis
Sed0008744 Sechium edule
Sed0014745 Sechium edule
SEGI_06931 Sequoiadendron giganteum
SGA_v2.0_scaffold646G53323 Striga asiatica
SGA_v2.0_scaffold646G53324 Striga asiatica
SMO364G0792 Selaginella moellendorffii
Solyc10g037950.2 Solanum lycopersicum
Solyc10g037960.3 Solanum lycopersicum
Sopen10g011740 Solanum pennellii
Sp2g18470 Schrenkiella parvula
TAR636G1692 Trochodendron aralioides
THA.LOC104819060 Tarenaya hassleriana
Thecc.01G414500 Theobroma cacao
Thhalv10004473m.g Eutrema salsugineum
TPR.G1074 Trifolium pratense
TPR.G13313 Trifolium pratense
TPR.G21737 Trifolium pratense
TPR.G21746 Trifolium pratense
TWI09G0675 Tripterygium wilfordii
TWI53G0546 Tripterygium wilfordii
unitig_26.g9596 Utricularia gibba
vmacro21170 Vaccinium macrocarpon
vmacro21176 Vaccinium macrocarpon
VMungo1127G2059 Vigna mungo
Zm00001eb189240 Zea mays

User provided reference genes

Program Settings