Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p47190 Brassica napus
A07p10120 Brassica napus
A09p21140 Brassica napus
Aa31LG2G17800 Aethionema arabicum
Aa31LG9G8740 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.3509 Anthoceros agrestis
Actinidia29265 Actinidia chinensis
Ah.01g003600 Amaranthus hybridus
AL8G15400 Arabidopsis lyrata
Aqoxy1G01504 Aquilegia oxysepala
Aqoxy1G01508 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.06Y4PY Arachis hypogaea
AT5G44450 Arabidopsis thaliana
ATR0763G041 Amborella trichopoda
Atru.chr10.695 Acer truncatum
AUR62033057 Chenopodium quinoa
AUR62042202 Chenopodium quinoa
BcaB07g30524 Brassica carinata
BcaB07g30944 Brassica carinata
BcaC04g21829 Brassica carinata
BcaC06g31615 Brassica carinata
BcaC06g34553 Brassica carinata
BolC7t43252H Brassica oleracea
BolC9t55580H Brassica oleracea
BraA06t27590Z Brassica rapa
BraA07t28805Z Brassica rapa
BraA09t37720Z Brassica rapa
C07p27240 Brassica napus
C09p26950 Brassica napus
CAN.G39.30 Capsicum annuum
CANSAT78G1346 Cannabis sativa
CARHR114890 Cardamine hirsuta
CARHR178630 Cardamine hirsuta
Carub.0008s0404 Capsella rubella
Ca_18306_v3 Cicer arietinum L.
CBR_g19259 Chara braunii
Cc08_g07170 Coffea canephora
CDE02G0074 Ceratophyllum demersum
CDE05G2614 Ceratophyllum demersum
Cfa000771 Carpinus fangiana
Cfa017779 Carpinus fangiana
Ciclev10016195m.g Citrus clementina
CiPaw.09G147600 Carya illinoinensis
ClCG01G025350 Citrullus lanatus
COL.COLO4_26880 Corchorus olitorius
Cpa.g.sc489.2 Carica papaya
Cre06.g274400 Chlamydomonas reinhardtii
CsaV3_6G052590 Cucumis sativus L.
CSS0000752 Camellia sinensis var. sinensis
CSS0004293 Camellia sinensis var. sinensis
DCAR_000834 Daucus carota
Dinv04290 Davidia involucrata
Dinv04294 Davidia involucrata
Dinv09223 Davidia involucrata
Dinv23919 Davidia involucrata
Duzib235G1425 Durio zibethinus
ECA234G4512 Erigeron canadensis
EL10Ac9g22329 Beta vulgaris
Eucgr.D01014 Eucalyptus grandis
FAN16G1000 Fragaria x ananassa
FAN21G1306 Fragaria x ananassa
FAN25G2940 Fragaria x ananassa
FvH4_3g11170 Fragaria vesca
Glyma.04G136150 Glycine max
Glyma.05G124100 Glycine max
Glyma.08G079300 Glycine max
Gohir.A10G005900 Gossypium hirsutum
Gohir.D10G005900 Gossypium hirsutum
Gorai.011G006700 Gossypium raimondii
GSVIVG01021778001 Vitis vinifera
GSVIVG01037925001 Vitis vinifera
HanXRQChr12g0359761 Helianthus annuus
Haze_05939 Corylus avellana
Haze_05942 Corylus avellana
Hma1.2p1_0721F.1_g208670 Hydrangea macrophylla
Hma1.2p1_0721F.1_g208680 Hydrangea macrophylla
HPP92_000943 Vanilla planifolia
Lalb_Chr12g0208701 Lupinus albus
Lalb_Chr13g0291531 Lupinus albus
Lj2C336G9 Lonicera japonica
Lj4g0006881 Lotus japonicus
Lsat_1_v5_gn_5_75320 Lactuca sativa
Manes.14G126000 Manihot esculenta
Mapoly0083s0001 Marchantia polymorpha
MBI18_g27137_MAGBIO Magnolia biondii
MCO11G684 Micromonas commoda
MD05G1265300 Malus domestica
MD10G1243300 Malus domestica
Medtr4g094452 Medicago truncatula
MELO3C007049.2 Cucumis melo
Migut.D00154 Erythranthe guttata
Migut.M01924 Erythranthe guttata
MSTRG.7559 Avicennia marina
Nitab4.5_0000100g0010 Nicotiana tabacum
Nitab4.5_0000607g0120 Nicotiana tabacum
Nitab4.5_0000637g0040 Nicotiana tabacum
Nitab4.5_0001154g0100 Nicotiana tabacum
Nn7g37791 Nelumbo nucifera
Oeu000506.1 Olea europaea
Os03g0780900 Oryza sativa ssp. japonica
Os08g0217050 Oryza sativa ssp. japonica
Peaxi162Scf00155g00513 Petunia axillaris
PGR083G0243 Punica granatum
PGSC0003DMG400009806 Solanum tuberosum
PGSC0003DMG400015105 Solanum tuberosum
Phvul.002G201500 Phaseolus vulgaris
Potri.011G157500 Populus trichocarpa
Pp3c22_8670 Physcomitrium patens
PRCOL_00002523 Prasinoderma coloniale
Prupe.4G100600 Prunus persica
Prupe.4G100800 Prunus persica
Psat7g094280 Pisum sativum
PSO541G1959 Papaver somniferum
PSO675G4367 Papaver somniferum
QL05p064527 Quercus lobata
RcHm_v2.0_Chr5g0018081 Rosa chinensis
Rhsim13G0125000 Rhododendron simsii
Sabra11G0142700 Salix brachista
Sabra16G0312400 Salix brachista
SalBow3G1375 Salvia bowleyana
SalBow8G0467 Salvia bowleyana
Sc04g0004240 Simmondsia chinensis
Sed0002797 Sechium edule
SEGI_24201 Sequoiadendron giganteum
SMO364G0300 Selaginella moellendorffii
Solyc02g021700.4 Solanum lycopersicum
Sopen02g006280 Solanum pennellii
Sp2g09280 Schrenkiella parvula
TAR626G0222 Trochodendron aralioides
THA.LOC104812070 Tarenaya hassleriana
Thecc.06G009000 Theobroma cacao
Thecc.06G009200 Theobroma cacao
Thecc.06G009400 Theobroma cacao
Thecc.06G009800 Theobroma cacao
Thecc.06G010000 Theobroma cacao
Thhalv10000956m.g Eutrema salsugineum
TPR.G23781 Trifolium pratense
TWI38G1381 Tripterygium wilfordii
unitig_748.g7349 Utricularia gibba
vmacro03466 Vaccinium macrocarpon
vmacro21870 Vaccinium macrocarpon
VMungo0251G0080 Vigna mungo
Zm00001eb059610 Zea mays

User provided reference genes

Program Settings