Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p49360 Brassica napus
A04p20740 Brassica napus
A05p26530 Brassica napus
Actinidia26773 Actinidia chinensis
Actinidia40274 Actinidia chinensis
Actinidia40275 Actinidia chinensis
Ah.13g074630 Amaranthus hybridus
AL7G39450 Arabidopsis lyrata
Aqoxy2G02976 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.PZAP36 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Z6JJZG Arachis hypogaea
AT4G15840 Arabidopsis thaliana
ATR0796G268 Amborella trichopoda
Atru.BG.90.p Acer truncatum
Atru.chr4.2851 Acer truncatum
AUR62041505 Chenopodium quinoa
AUR62042850 Chenopodium quinoa
BcaC02g08264 Brassica carinata
BcaC05g28381 Brassica carinata
BcaC06g32968 Brassica carinata
BcaC06g33444 Brassica carinata
BolC4t27184H Brassica oleracea
BolC7t45270H Brassica oleracea
BraA03t14037Z Brassica rapa
BraA04t17647Z Brassica rapa
C04p56580 Brassica napus
C05p44590 Brassica napus
C07p47430 Brassica napus
C09p28810 Brassica napus
CAN.G185.38 Capsicum annuum
CANSAT78G0446 Cannabis sativa
CARHR290370 Cardamine hirsuta
Carub.0007s2581 Capsella rubella
Ca_21491_v3 Cicer arietinum L.
Cc03_g01850 Coffea canephora
CDE05G1280 Ceratophyllum demersum
CDE11G0961 Ceratophyllum demersum
Cfa001632 Carpinus fangiana
Cfa015392 Carpinus fangiana
Ciclev10004285m.g Citrus clementina
CiPaw.01G148000 Carya illinoinensis
ClCG05G006140 Citrullus lanatus
COL.COLO4_13862 Corchorus olitorius
Cpa.g.c37401 Carica papaya
Cpa.g.sc66.36 Carica papaya
Cpa.g.sc66.37 Carica papaya
Cre13.g580450 Chlamydomonas reinhardtii
CsaV3_3G014700 Cucumis sativus L.
CSS0043341 Camellia sinensis var. sinensis
DCAR_027073 Daucus carota
Dinv29746 Davidia involucrata
Dinv44377 Davidia involucrata
Duzib151G1199 Durio zibethinus
ECA240G0403 Erigeron canadensis
EL10Ac3g06605 Beta vulgaris
Eucgr.B01324 Eucalyptus grandis
FAN07G0879 Fragaria x ananassa
FAN12G0573 Fragaria x ananassa
FAN12G1245 Fragaria x ananassa
FAN17G2169 Fragaria x ananassa
FvH4_4g18240 Fragaria vesca
Glyma.07G247100 Glycine max
Glyma.17G026900 Glycine max
Gohir.A02G049600 Gossypium hirsutum
Gohir.D02G054700 Gossypium hirsutum
Gorai.005G060600 Gossypium raimondii
GSVIVG01017731001 Vitis vinifera
GSVIVG01017732001 Vitis vinifera
HanXRQChr09g0244011 Helianthus annuus
HanXRQChr12g0372601 Helianthus annuus
HanXRQChr13g0411191 Helianthus annuus
HanXRQChr14g0449221 Helianthus annuus
Haze_01194 Corylus avellana
Hma1.2p1_1185F.1_g265090 Hydrangea macrophylla
Hma1.2p1_2906F.1_g330120 Hydrangea macrophylla
HPP92_002144 Vanilla planifolia
HPP92_002145 Vanilla planifolia
Hund20553 Selenicereus undatus
Lalb_Chr18g0051671 Lupinus albus
Lj4g0026758 Lotus japonicus
Lj6A677G73 Lonicera japonica
Lj6C677T9 Lonicera japonica
Lsat_1_v5_gn_5_54040 Lactuca sativa
Manes.03G195900 Manihot esculenta
Mapoly0037s0064 Marchantia polymorpha
MBI18_g13696_MAGBIO Magnolia biondii
MCO04G464 Micromonas commoda
MD08G1066800 Malus domestica
MD13G1167900 Malus domestica
Medtr4g119960 Medicago truncatula
MELO3C006668.2 Cucumis melo
Migut.G00154 Erythranthe guttata
MSTRG.3910 Avicennia marina
Nitab4.5_0000059g0420 Nicotiana tabacum
Nitab4.5_0001120g0020 Nicotiana tabacum
Nn3g21453 Nelumbo nucifera
Oeu029706.1 Olea europaea
Os01g0932600 Oryza sativa ssp. japonica
Peaxi162Scf01123g00233 Petunia axillaris
PGR031G1610 Punica granatum
Phvul.003G105900 Phaseolus vulgaris
Potri.010G014000 Populus trichocarpa
Pp3c16_9230 Physcomitrium patens
Pp3c20_17000 Physcomitrium patens
Pp3c5_16090 Physcomitrium patens
Pp3c6_10590 Physcomitrium patens
PRCOL_00005501 Prasinoderma coloniale
Prupe.1G135400 Prunus persica
Psat4g027360 Pisum sativum
PSO170G5664 Papaver somniferum
PSO210G5109 Papaver somniferum
QL06p009017 Quercus lobata
RcHm_v2.0_Chr4g0422381 Rosa chinensis
Rhsim04G0223000 Rhododendron simsii
Sabra10G0008900 Salix brachista
Sc25g0004780 Simmondsia chinensis
Sed0007600 Sechium edule
SEGI_08317 Sequoiadendron giganteum
SEGI_24032 Sequoiadendron giganteum
SEGI_35628 Sequoiadendron giganteum
SEGI_38162 Sequoiadendron giganteum
SEGI_40593 Sequoiadendron giganteum
SGA_v2.0_scaffold18G08298 Striga asiatica
Solyc01g080620.3 Solanum lycopersicum
Sopen01g032430 Solanum pennellii
Sp7g14240 Schrenkiella parvula
TAR362G0604 Trochodendron aralioides
TAR633G1039 Trochodendron aralioides
TAR633G1238 Trochodendron aralioides
TAR633G2729 Trochodendron aralioides
THA.LOC104820270 Tarenaya hassleriana
Thecc.04G285400 Theobroma cacao
Thhalv10024402m.g Eutrema salsugineum
TPR.G3193 Trifolium pratense
TWI09G0775 Tripterygium wilfordii
TWI53G1858 Tripterygium wilfordii
unitig_748.g8730 Utricularia gibba
unitig_748.g8731 Utricularia gibba
vmacro08159 Vaccinium macrocarpon
VMungo1127G0889 Vigna mungo
VMungo1215G0467 Vigna mungo
Zm00001eb142310 Zea mays
Zm00001eb363540 Zea mays

User provided reference genes

Program Settings