Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A10p16320 Brassica napus
Aa31LG1G11980 Aethionema arabicum
Aa31LG4G15720 Aethionema arabicum
Actinidia08546 Actinidia chinensis
Ah.08g220210 Amaranthus hybridus
AL48U10090 Arabidopsis lyrata
AL8G35480 Arabidopsis lyrata
Aqoxy1G00819 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.4JU9WJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NY9X43 Arachis hypogaea
AT5G59210 Arabidopsis thaliana
ATR0559G139 Amborella trichopoda
Atru.chr3.4014 Acer truncatum
AUR62001727 Chenopodium quinoa
AUR62020048 Chenopodium quinoa
BcaB05g22478 Brassica carinata
BcaB08g36287 Brassica carinata
BcaC03g14039 Brassica carinata
BcaC04g19820 Brassica carinata
BcaC06g34357 Brassica carinata
BolC2t07376H Brassica oleracea
BolC9t57995H Brassica oleracea
BraA10t43715Z Brassica rapa
C02p12810 Brassica napus
C02p36410 Brassica napus
C09p51370 Brassica napus
CAN.G173.8 Capsicum annuum
CANSAT54G0396 Cannabis sativa
CARHR285340 Cardamine hirsuta
Carub.0008s1974 Capsella rubella
Ca_01301_v3 Cicer arietinum L.
CBR_g23966 Chara braunii
Cc01_g13430 Coffea canephora
CDE04G2524 Ceratophyllum demersum
CDE07G0843 Ceratophyllum demersum
Cfa011575 Carpinus fangiana
Ciclev10028430m.g Citrus clementina
CiPaw.13G087700 Carya illinoinensis
CiPaw.14G064400 Carya illinoinensis
ClCG02G019860 Citrullus lanatus
COL.COLO4_18589 Corchorus olitorius
Cpa.g.sc81.65 Carica papaya
Cre01.g043400 Chlamydomonas reinhardtii
CsaV3_6G016570 Cucumis sativus L.
CsaV3_7G010040 Cucumis sativus L.
CSS0023124 Camellia sinensis var. sinensis
DCAR_007424 Daucus carota
Dinv17056 Davidia involucrata
Dinv43000 Davidia involucrata
Dinv43097 Davidia involucrata
ECA248G1020 Erigeron canadensis
EL10Ac7g16079 Beta vulgaris
Eucgr.B02303 Eucalyptus grandis
FAN11G1104 Fragaria x ananassa
FAN11G2960 Fragaria x ananassa
FAN11G3766 Fragaria x ananassa
FAN16G0192 Fragaria x ananassa
FAN17G1485 Fragaria x ananassa
FAN21G0275 Fragaria x ananassa
FAN25G0674 Fragaria x ananassa
FAN27G2862 Fragaria x ananassa
FAN28G2746 Fragaria x ananassa
FvH4_2g37740 Fragaria vesca
FvH4_3g06640 Fragaria vesca
FvH4_3g06680 Fragaria vesca
FvH4_3g37100 Fragaria vesca
Glyma.13G339200 Glycine max
Glyma.15G035200 Glycine max
Gohir.A03G045500 Gossypium hirsutum
Gohir.D03G121500 Gossypium hirsutum
Gorai.003G128600 Gossypium raimondii
GSVIVG01024871001 Vitis vinifera
HanXRQChr01g0010681 Helianthus annuus
Haze_24189 Corylus avellana
Hma1.2p1_0274F.1_g110490 Hydrangea macrophylla
Hma1.2p1_0274F.1_g110500 Hydrangea macrophylla
HPP92_018158 Vanilla planifolia
Hund18883 Selenicereus undatus
Lalb_Chr14g0372031 Lupinus albus
Lalb_Chr14g0372041 Lupinus albus
Lalb_Chr24g0397151 Lupinus albus
Lj1A145T60 Lonicera japonica
Lj3g0005158 Lotus japonicus
Lsat_1_v5_gn_2_81921 Lactuca sativa
Lsat_1_v5_gn_5_169740 Lactuca sativa
Lsat_1_v5_gn_9_24160 Lactuca sativa
Manes.01G168300 Manihot esculenta
Manes.02G127600 Manihot esculenta
Manes.04G070850 Manihot esculenta
Mapoly0044s0102 Marchantia polymorpha
MBI05_g02648_MAGBIO Magnolia biondii
MD03G1084900 Malus domestica
MD11G1092400 Malus domestica
Medtr2g097780 Medicago truncatula
MELO3C025886.2 Cucumis melo
Migut.N00899 Erythranthe guttata
MSTRG.12654 Avicennia marina
Nitab4.5_0000507g0040 Nicotiana tabacum
Nitab4.5_0006512g0020 Nicotiana tabacum
Nn2g13505 Nelumbo nucifera
Oeu004184.2 Olea europaea
Os03g0268100 Oryza sativa ssp. japonica
Peaxi162Scf00676g00221 Petunia axillaris
PGR102G1735 Punica granatum
Phvul.L008343 Phaseolus vulgaris
Potri.001G245500 Populus trichocarpa
Pp3c1_10500 Physcomitrium patens
Prupe.6G068200 Prunus persica
Psat5g287560 Pisum sativum
PSO339G3476 Papaver somniferum
PSO384G3155 Papaver somniferum
QL01p028069 Quercus lobata
RcHm_v2.0_Chr4g0405851 Rosa chinensis
RcHm_v2.0_Chr5g0066581 Rosa chinensis
RcHm_v2.0_Chr5g0066731 Rosa chinensis
RcHm_v2.0_Chr5g0066821 Rosa chinensis
RcHm_v2.0_Chr5g0066831 Rosa chinensis
RcHm_v2.0_Chr7g0185271 Rosa chinensis
Rhsim13G0076500 Rhododendron simsii
Rhsim13G0076600 Rhododendron simsii
Sabra09G0026700 Salix brachista
Sabra16G0148900 Salix brachista
Sc12g0001210 Simmondsia chinensis
Sc12g0001220 Simmondsia chinensis
Sed0022829 Sechium edule
SEGI_23562 Sequoiadendron giganteum
SGA_v2.0_scaffold183G39886 Striga asiatica
SHI05905 Sapria himalayana
SMO361G0431 Selaginella moellendorffii
Sopen09g019050 Solanum pennellii
Sp6g20780 Schrenkiella parvula
TAR369G1109 Trochodendron aralioides
THA.LOC104814887 Tarenaya hassleriana
Thecc.09G313600 Theobroma cacao
Thhalv10013620m.g Eutrema salsugineum
TPR.G20043 Trifolium pratense
TPR.G6835 Trifolium pratense
TWI79G1569 Tripterygium wilfordii
unitig_52.g16817 Utricularia gibba
vmacro03023 Vaccinium macrocarpon
VMungo1080G1008 Vigna mungo
Zm00001eb011990 Zea mays
Zm00001eb397870 Zea mays

User provided reference genes

Program Settings