Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p19190 Brassica napus
Aa31LG10G6820 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.2974 Anthoceros agrestis
Actinidia19548 Actinidia chinensis
Ah.10g032810 Amaranthus hybridus
AL4G30540 Arabidopsis lyrata
Aqoxy5G02491 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.5GP605 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T7P6Q4 Arachis hypogaea
AT2G34570 Arabidopsis thaliana
ATR1136G175 Amborella trichopoda
Atru.chr6.2707 Acer truncatum
AUR62009346 Chenopodium quinoa
AUR62017870 Chenopodium quinoa
AUR62037816 Chenopodium quinoa
BcaB01g06368 Brassica carinata
BcaC01g05789 Brassica carinata
BcaC02g11519 Brassica carinata
BolC3t14622H Brassica oleracea
BolC4t23029H Brassica oleracea
BraA03t11174Z Brassica rapa
BraA05t20057Z Brassica rapa
C03p22390 Brassica napus
C04p14460 Brassica napus
CAN.G792.79 Capsicum annuum
CANSAT54G1155 Cannabis sativa
CARHR128660 Cardamine hirsuta
Carub.0004s1624 Capsella rubella
Ca_26258_v3 Cicer arietinum L.
CBR_g8346 Chara braunii
Cc00_g24660 Coffea canephora
Cc00_g27920 Coffea canephora
Cc00_g29040 Coffea canephora
Cc06_g13990 Coffea canephora
Cfa007146 Carpinus fangiana
Cfa022755 Carpinus fangiana
Ciclev10016162m.g Citrus clementina
CiPaw.04G000800 Carya illinoinensis
ClCG01G008500 Citrullus lanatus
COL.COLO4_13388 Corchorus olitorius
Cpa.g.sc70.54 Carica papaya
Cre11.g480800 Chlamydomonas reinhardtii
CsaV3_5G024970 Cucumis sativus L.
CSS0005176 Camellia sinensis var. sinensis
CSS0033174 Camellia sinensis var. sinensis
DCAR_022112 Daucus carota
Dinv33272 Davidia involucrata
Duzib187G0989 Durio zibethinus
ECA238G2078 Erigeron canadensis
EL10Ac6g13414 Beta vulgaris
Eucgr.I01592 Eucalyptus grandis
FAN15G2064 Fragaria x ananassa
FAN24G2993 Fragaria x ananassa
FAN27G1266 Fragaria x ananassa
FvH4_2g10500 Fragaria vesca
Glyma.02G271800 Glycine max
Glyma.14G044800 Glycine max
Gohir.A11G064100 Gossypium hirsutum
Gohir.D11G068400 Gossypium hirsutum
Gorai.007G073200 Gossypium raimondii
GSVIVG01032972001 Vitis vinifera
HanXRQChr07g0200241 Helianthus annuus
Hma1.2p1_0474F.1_g160730 Hydrangea macrophylla
Hma1.2p1_0474F.1_g160740 Hydrangea macrophylla
HPP92_002470 Vanilla planifolia
Hund29750 Selenicereus undatus
Hund29752 Selenicereus undatus
Lalb_Chr10g0096401 Lupinus albus
Lj9A368G50 Lonicera japonica
LjContig00564g0024425 Lotus japonicus
Lsat_1_v5_gn_2_86720 Lactuca sativa
Manes.11G112500 Manihot esculenta
Mapoly0006s0036 Marchantia polymorpha
MCO15G315 Micromonas commoda
MD08G1181300 Malus domestica
MD09G1264600 Malus domestica
MD16G1246600 Malus domestica
Medtr2g097630 Medicago truncatula
Medtr5g071380 Medicago truncatula
MELO3C005096.2 Cucumis melo
Migut.B00249 Erythranthe guttata
MSTRG.20092 Avicennia marina
Nitab4.5_0000568g0280 Nicotiana tabacum
Nitab4.5_0004836g0020 Nicotiana tabacum
Nitab4.5_0006090g0030 Nicotiana tabacum
Nn8g40353 Nelumbo nucifera
Nn8g41301 Nelumbo nucifera
Oeu020806.2 Olea europaea
Oeu034171.3 Olea europaea
Os02g0468200 Oryza sativa ssp. japonica
Peaxi162Scf00102g01534 Petunia axillaris
PGR142G3154 Punica granatum
PGR142G3427 Punica granatum
PGSC0003DMG400005779 Solanum tuberosum
PGSC0003DMG400011003 Solanum tuberosum
Phvul.005G025400 Phaseolus vulgaris
Phvul.005G158400 Phaseolus vulgaris
Potri.004G197200 Populus trichocarpa
Potri.009G159400 Populus trichocarpa
Pp3c2_27880 Physcomitrium patens
PRCOL_00002591 Prasinoderma coloniale
Prupe.1G585500 Prunus persica
Prupe.5G024800 Prunus persica
Psat2g056880 Pisum sativum
PSO017G0788 Papaver somniferum
PSO063G1622 Papaver somniferum
QL02p069234 Quercus lobata
RcHm_v2.0_Chr6g0267991 Rosa chinensis
Rhsim08G0038500 Rhododendron simsii
Rhsim09G0096800 Rhododendron simsii
Sabra02G0148900 Salix brachista
Sabra04G0133600 Salix brachista
Sabra07G0096200 Salix brachista
Sabra07G0113400 Salix brachista
Sabra10G0082800 Salix brachista
Sabra16G0085100 Salix brachista
Sabra16G0093500 Salix brachista
SalBow6G5022 Salvia bowleyana
SalBow6G6215 Salvia bowleyana
Sc14g0002660 Simmondsia chinensis
Sed0000255 Sechium edule
SEGI_09940 Sequoiadendron giganteum
SEGI_17090 Sequoiadendron giganteum
SGA_v2.0_scaffold32G13165 Striga asiatica
SHI31386 Sapria himalayana
SHI33526 Sapria himalayana
SMO347G0017 Selaginella moellendorffii
Solyc08g008040.3 Solanum lycopersicum
Solyc10g084740.3 Solanum lycopersicum
Sopen08g003920 Solanum pennellii
Sopen10g034190 Solanum pennellii
Sp4g16830 Schrenkiella parvula
TAR381G1230 Trochodendron aralioides
TAR624G0372 Trochodendron aralioides
THA.LOC104802536 Tarenaya hassleriana
Thecc.04G049000 Theobroma cacao
Thhalv10017887m.g Eutrema salsugineum
TPR.G27812 Trifolium pratense
TWI32G1102 Tripterygium wilfordii
unitig_744.g24245 Utricularia gibba
vmacro18391 Vaccinium macrocarpon
VMungo1309G1271 Vigna mungo
Zm00001eb319780 Zea mays

User provided reference genes

Program Settings