Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p24140 Brassica napus
A05p13810 Brassica napus
Aa31LG5G5280 Aethionema arabicum
Actinidia22429 Actinidia chinensis
Ah.01g016950 Amaranthus hybridus
Ah.05g173390 Amaranthus hybridus
AL1G15680 Arabidopsis lyrata
AL4G26950 Arabidopsis lyrata
Aqoxy1G00251 Aquilegia oxysepala
Aqoxy3G03156 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0KQV7A Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.31Z3CL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.5IT82G Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FU3306 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VX2J7C Arachis hypogaea
AT1G05780 Arabidopsis thaliana
AT2G31710 Arabidopsis thaliana
ATR1120G033 Amborella trichopoda
Atru.chr1.851 Acer truncatum
AUR62004132 Chenopodium quinoa
AUR62023913 Chenopodium quinoa
AUR62038333 Chenopodium quinoa
BcaB01g04025 Brassica carinata
BcaB06g28531 Brassica carinata
BcaC02g11279 Brassica carinata
BolC4t23374H Brassica oleracea
BolC4t27578H Brassica oleracea
BraA04t17934Z Brassica rapa
C04p18180 Brassica napus
C04p60870 Brassica napus
CAN.G350.33 Capsicum annuum
CANSAT25G1004 Cannabis sativa
CARHR005290 Cardamine hirsuta
CARHR125350 Cardamine hirsuta
Carub.0004s1300 Capsella rubella
Ca_28197_v3 Cicer arietinum L.
CBR_g30301 Chara braunii
Cc03_g07280 Coffea canephora
Cc10_g11580 Coffea canephora
CDE05G0701 Ceratophyllum demersum
CDE05G1696 Ceratophyllum demersum
Cfa001130 Carpinus fangiana
Cfa013238 Carpinus fangiana
Ciclev10017270m.g Citrus clementina
CiPaw.09G137400 Carya illinoinensis
ClCG01G025510 Citrullus lanatus
COL.COLO4_15978 Corchorus olitorius
Cpa.g.sc51.137 Carica papaya
CsaV3_6G052780 Cucumis sativus L.
CSS0024418 Camellia sinensis var. sinensis
CSS0040197 Camellia sinensis var. sinensis
DCAR_002456 Daucus carota
DCAR_002458 Daucus carota
Dinv31186 Davidia involucrata
Duzib151G0973 Durio zibethinus
Duzib212G0597 Durio zibethinus
ECA238G4336 Erigeron canadensis
EL10Ac1g00803 Beta vulgaris
EL10Ac9g21107 Beta vulgaris
Eucgr.H02355 Eucalyptus grandis
FAN11G1405 Fragaria x ananassa
FAN12G2425 Fragaria x ananassa
FAN16G1303 Fragaria x ananassa
FAN21G0135 Fragaria x ananassa
FAN22G0530 Fragaria x ananassa
FvH4_3g12930 Fragaria vesca
FvH4_4g01060 Fragaria vesca
Glyma.13G170400 Glycine max
Glyma.19G010500 Glycine max
Gohir.A09G226900 Gossypium hirsutum
Gohir.A10G107101 Gossypium hirsutum
Gohir.D09G227900 Gossypium hirsutum
Gorai.006G250600 Gossypium raimondii
GSVIVG01012142001 Vitis vinifera
HanXRQChr06g0184021 Helianthus annuus
HanXRQChr14g0428301 Helianthus annuus
Haze_05264 Corylus avellana
Hma1.2p1_0088F.1_g045170 Hydrangea macrophylla
HPP92_012976 Vanilla planifolia
Hund00748 Selenicereus undatus
Hund17073 Selenicereus undatus
Lalb_Chr02g0160001 Lupinus albus
Lalb_Chr02g0160211 Lupinus albus
Lj2g0008924 Lotus japonicus
Lsat_1_v5_gn_2_4960 Lactuca sativa
Manes.01G042100 Manihot esculenta
Manes.05G190800 Manihot esculenta
Mapoly0098s0021 Marchantia polymorpha
MBI02_g01139_MAGBIO Magnolia biondii
MBI14_g01725_MAGBIO Magnolia biondii
MD05G1247100 Malus domestica
MD10G1227700 Malus domestica
Medtr6g017185 Medicago truncatula
MELO3C007032.2 Cucumis melo
Migut.C01265 Erythranthe guttata
Migut.N03355 Erythranthe guttata
MSTRG.22460 Avicennia marina
Nitab4.5_0002741g0010 Nicotiana tabacum
Nitab4.5_0004741g0030 Nicotiana tabacum
Nn7g38328 Nelumbo nucifera
Oeu017888.1 Olea europaea
Oeu021212.1 Olea europaea
Os04g0612900 Oryza sativa ssp. japonica
Peaxi162Scf00004g02726 Petunia axillaris
PGR142G2670 Punica granatum
PGSC0003DMG400010917 Solanum tuberosum
Phvul.004G017800 Phaseolus vulgaris
Potri.001G160500 Populus trichocarpa
Pp3c12_11530 Physcomitrium patens
Prupe.4G117300 Prunus persica
Psat0s5346g0120 Pisum sativum
PSO170G3626 Papaver somniferum
PSO541G1812 Papaver somniferum
PSO675G0749 Papaver somniferum
PSO782G3340 Papaver somniferum
QL11p012305 Quercus lobata
RcHm_v2.0_Chr5g0021041 Rosa chinensis
Rhsim04G0167900 Rhododendron simsii
Rhsim12G0144200 Rhododendron simsii
Sabra01G0131700 Salix brachista
SalBow1G3231 Salvia bowleyana
SalBow6G1192 Salvia bowleyana
SalBow7G2991 Salvia bowleyana
Sc10g0007720 Simmondsia chinensis
Sed0007631 Sechium edule
SGA_v2.0_scaffold118G32500 Striga asiatica
SGA_v2.0_scaffold149G36579 Striga asiatica
SMO300G0007 Selaginella moellendorffii
Solyc11g065610.1 Solanum lycopersicum
Sopen11g025310 Solanum pennellii
Sp1g13000 Schrenkiella parvula
TAR627G0156 Trochodendron aralioides
TAR629G0996 Trochodendron aralioides
THA.LOC104800917 Tarenaya hassleriana
THA.LOC104815870 Tarenaya hassleriana
Thecc.04G266100 Theobroma cacao
Thhalv10017819m.g Eutrema salsugineum
TWI15G1056 Tripterygium wilfordii
TWI63G0865 Tripterygium wilfordii
vmacro03554 Vaccinium macrocarpon
VMungo0464G2009 Vigna mungo
Zm00001eb071020 Zea mays
Zm00001eb430740 Zea mays

User provided reference genes

Program Settings