Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A08p24490 Brassica napus
A09p36080 Brassica napus
Aa31LG6G5400 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_369.184 Anthoceros agrestis
Actinidia13436 Actinidia chinensis
Actinidia33666 Actinidia chinensis
AL1G44320 Arabidopsis lyrata
Aqoxy4G00026 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.9042LP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZS1M1K Arachis hypogaea
AT1G30380 Arabidopsis thaliana
ATR0681G400 Amborella trichopoda
Atru.chr10.966 Acer truncatum
AUR62009823 Chenopodium quinoa
AUR62038135 Chenopodium quinoa
BcaB03g12211 Brassica carinata
BcaB07g32648 Brassica carinata
BcaC01g00188 Brassica carinata
BcaC05g27071 Brassica carinata
BolC3t19927H Brassica oleracea
BolC5t31665H Brassica oleracea
BraA08t34405Z Brassica rapa
BraA09t39132Z Brassica rapa
C03p76720 Brassica napus
C05p29330 Brassica napus
CAN.G1882.1 Capsicum annuum
CANSAT35G0137 Cannabis sativa
CARHR029770 Cardamine hirsuta
Carub.0001s2858 Capsella rubella
Ca_12734_v3 Cicer arietinum L.
Ca_12740_v3 Cicer arietinum L.
CBR_g39729 Chara braunii
Cc09_g08490 Coffea canephora
CDE01G0641 Ceratophyllum demersum
CDE12G0489 Ceratophyllum demersum
Cfa000859 Carpinus fangiana
Ciclev10017170m.g Citrus clementina
CiPaw.09G117100 Carya illinoinensis
CiPaw.10G086700 Carya illinoinensis
ClCG01G025030 Citrullus lanatus
COL.COLO4_17668 Corchorus olitorius
Cpa.g.sc17.68 Carica papaya
Cre17.g724300 Chlamydomonas reinhardtii
CsaV3_6G052210 Cucumis sativus L.
CSS0007721 Camellia sinensis var. sinensis
CSS0016265 Camellia sinensis var. sinensis
DCAR_004804 Daucus carota
DCAR_004805 Daucus carota
Dinv15893 Davidia involucrata
Dinv32199 Davidia involucrata
Duzib052G0655 Durio zibethinus
Duzib132G0868 Durio zibethinus
Duzib248G0887 Durio zibethinus
ECA236G4370 Erigeron canadensis
EL10Ac7g15766 Beta vulgaris
Eucgr.D00234 Eucalyptus grandis
FAN11G2263 Fragaria x ananassa
FAN16G0550 Fragaria x ananassa
FAN21G2293 Fragaria x ananassa
FAN25G1721 Fragaria x ananassa
FvH4_3g09680 Fragaria vesca
Glyma.09G087700 Glycine max
Glyma.15G194300 Glycine max
Gohir.A03G216800 Gossypium hirsutum
Gohir.D02G238400 Gossypium hirsutum
Gorai.005G266900 Gossypium raimondii
GSVIVG01021584001 Vitis vinifera
HanXRQChr04g0113581 Helianthus annuus
HanXRQChr15g0481551 Helianthus annuus
Haze_05746 Corylus avellana
Hma1.2p1_0689F.1_g203690 Hydrangea macrophylla
Hma1.2p1_1418F.1_g282220 Hydrangea macrophylla
HPP92_019500 Vanilla planifolia
Hund18717 Selenicereus undatus
Lalb_Chr08g0233241 Lupinus albus
Lalb_Chr23g0275991 Lupinus albus
Lj1g0015817 Lotus japonicus
Lsat_1_v5_gn_7_32001 Lactuca sativa
Manes.06G061100 Manihot esculenta
Manes.14G134800 Manihot esculenta
Mapoly0125s0033 Marchantia polymorpha
MBI02_g40641_MAGBIO Magnolia biondii
MBI02_g44634_MAGBIO Magnolia biondii
MCO04G068 Micromonas commoda
MD00G1109700 Malus domestica
MD05G1276100 Malus domestica
Medtr1g026820 Medicago truncatula
MELO3C007091.2 Cucumis melo
Migut.M01877 Erythranthe guttata
MSTRG.7528 Avicennia marina
Nitab4.5_0000100g0280 Nicotiana tabacum
Nitab4.5_0001809g0020 Nicotiana tabacum
Nitab4.5_0002991g0030 Nicotiana tabacum
Nitab4.5_0003368g0030 Nicotiana tabacum
Nn3g20272 Nelumbo nucifera
Nn4g26654 Nelumbo nucifera
Nn8g40769 Nelumbo nucifera
Oeu040090.1 Olea europaea
Os07g0148900 Oryza sativa ssp. japonica
Peaxi162Scf00045g02242 Petunia axillaris
PGR083G1323 Punica granatum
PGSC0003DMG400020505 Solanum tuberosum
Phvul.002G140800 Phaseolus vulgaris
Phvul.009G216400 Phaseolus vulgaris
Potri.006G254200 Populus trichocarpa
Potri.018G027600 Populus trichocarpa
Pp3c13_10520 Physcomitrium patens
Pp3c13_10540 Physcomitrium patens
Pp3c3_10740 Physcomitrium patens
PRCOL_00005455 Prasinoderma coloniale
Prupe.4G088200 Prunus persica
Psat0s1315g0080 Pisum sativum
PSO541G2745 Papaver somniferum
PSO675G1042 Papaver somniferum
QL05p054070 Quercus lobata
RcHm_v2.0_Chr5g0015361 Rosa chinensis
RcHm_v2.0_Chr5g0036151 Rosa chinensis
Rhsim13G0119400 Rhododendron simsii
Sabra18G0029900 Salix brachista
SalBow8G5437 Salvia bowleyana
Sc24g0001600 Simmondsia chinensis
Sed0012654 Sechium edule
Sed0026922 Sechium edule
SEGI_05857 Sequoiadendron giganteum
SGA_v2.0_scaffold223G42844 Striga asiatica
SMO358G0410 Selaginella moellendorffii
Solyc08g006930.3 Solanum lycopersicum
Sopen08g002900 Solanum pennellii
Sp1g26220 Schrenkiella parvula
Sp4g16930 Schrenkiella parvula
TAR624G1044 Trochodendron aralioides
TAR626G0103 Trochodendron aralioides
TAR626G0742 Trochodendron aralioides
THA.LOC104812683 Tarenaya hassleriana
THA.LOC104814318 Tarenaya hassleriana
Thecc.02G010800 Theobroma cacao
Thhalv10009090m.g Eutrema salsugineum
TPR.G24497 Trifolium pratense
TWI09G0405 Tripterygium wilfordii
TWI73G0862 Tripterygium wilfordii
unitig_61.g26080 Utricularia gibba
vmacro03415 Vaccinium macrocarpon
VMungo1309G1099 Vigna mungo
Zm00001eb299990 Zea mays

User provided reference genes

Program Settings