Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p13080 Brassica napus
A09p40160 Brassica napus
Aa31LG7G8380 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.1458 Anthoceros agrestis
AL1G38960 Arabidopsis lyrata
Aqoxy1G02417 Aquilegia oxysepala
Aqoxy2G00811 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.EK09V6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XG4VM3 Arachis hypogaea
AT1G26750 Arabidopsis thaliana
ATR0810G029 Amborella trichopoda
Atru.chr11.1609 Acer truncatum
AUR62032822 Chenopodium quinoa
BcaB03g14087 Brassica carinata
BcaC05g26391 Brassica carinata
BcaC06g35126 Brassica carinata
BolC5t31158H Brassica oleracea
BolC7t42473H Brassica oleracea
BraA07t29079Z Brassica rapa
BraA09t39514Z Brassica rapa
C05p24220 Brassica napus
C07p19560 Brassica napus
CAN.G228.3 Capsicum annuum
CAN.G293.9 Capsicum annuum
CANSAT80G0446 Cannabis sativa
CARHR025210 Cardamine hirsuta
Carub.0001s2427 Capsella rubella
Ca_02973_v3 Cicer arietinum L.
CBR_g30169 Chara braunii
Cc00_g16620 Coffea canephora
CDE02G1435 Ceratophyllum demersum
Cfa008943 Carpinus fangiana
Ciclev10032849m.g Citrus clementina
CiPaw.05G130500 Carya illinoinensis
ClCG00G005120 Citrullus lanatus
ClCG05G024080 Citrullus lanatus
ClCG08G001930 Citrullus lanatus
ClCG11G009930 Citrullus lanatus
COL.COLO4_28415 Corchorus olitorius
Cpa.g.sc57.36 Carica papaya
Cre12.g530500 Chlamydomonas reinhardtii
CsaV3_5G032960 Cucumis sativus L.
CSS0022308 Camellia sinensis var. sinensis
DCAR_013139 Daucus carota
Dinv34128 Davidia involucrata
Duzib114G0995 Durio zibethinus
EL10Ac8g18975 Beta vulgaris
Eucgr.I00218 Eucalyptus grandis
Eucgr.L00657 Eucalyptus grandis
Eucgr.L00661 Eucalyptus grandis
FAN15G0396 Fragaria x ananassa
FAN19G1549 Fragaria x ananassa
FAN23G1362 Fragaria x ananassa
FAN26G2856 Fragaria x ananassa
FvH4_1g30250 Fragaria vesca
Glyma.01G052200 Glycine max
Glyma.02G110400 Glycine max
Glyma.11G251200 Glycine max
Gohir.A05G412300 Gossypium hirsutum
Gohir.A10G054500 Gossypium hirsutum
Gohir.D04G003700 Gossypium hirsutum
Gohir.D10G056500 Gossypium hirsutum
Gorai.011G060300 Gossypium raimondii
Gorai.012G004900 Gossypium raimondii
GSVIVG01005152001 Vitis vinifera
GSVIVG01012217001 Vitis vinifera
HanXRQChr15g0476911 Helianthus annuus
HanXRQChr17g0545311 Helianthus annuus
Haze_01349 Corylus avellana
Hma1.2p1_1954F.1_g308920 Hydrangea macrophylla
HPP92_008614 Vanilla planifolia
Hund04408 Selenicereus undatus
Lalb_Chr12g0202851 Lupinus albus
Lj2g0009005 Lotus japonicus
Lj6g0009238 Lotus japonicus
Lj7A251G27 Lonicera japonica
Lj7C254T2 Lonicera japonica
Lj8C444T0 Lonicera japonica
Lj8C474T0 Lonicera japonica
Lsat_1_v5_gn_3_51960 Lactuca sativa
Manes.01G033800 Manihot esculenta
Mapoly0001s0053 Marchantia polymorpha
MCO03G233 Micromonas commoda
MD01G1063000 Malus domestica
MD07G1136300 Malus domestica
Medtr2g087760 Medicago truncatula
Medtr8g006800 Medicago truncatula
MELO3C012117.2 Cucumis melo
Migut.O00263 Erythranthe guttata
MSTRG.11557 Avicennia marina
Nitab4.5_0001147g0090 Nicotiana tabacum
Nitab4.5_0005903g0020 Nicotiana tabacum
Nn4g23238 Nelumbo nucifera
Oeu021067.1 Olea europaea
Oeu054855.1 Olea europaea
Os12g0209100 Oryza sativa ssp. japonica
Peaxi162Scf00320g00123 Petunia axillaris
PGR102G3250 Punica granatum
PGSC0003DMG400009555 Solanum tuberosum
Phvul.003G046600 Phaseolus vulgaris
Potri.010G165500 Populus trichocarpa
Pp3c14_7320 Physcomitrium patens
Prupe.2G171300 Prunus persica
Psat1g094200 Pisum sativum
PSO063G7616 Papaver somniferum
PSO832G0345 Papaver somniferum
QL03p069106 Quercus lobata
QL07p005102 Quercus lobata
QL93p1999_0168 Quercus lobata
RcHm_v2.0_Chr6g0271051 Rosa chinensis
RcHm_v2.0_Chr7g0220341 Rosa chinensis
RcHm_v2.0_Chr7g0220351 Rosa chinensis
Rhsim09G0138500 Rhododendron simsii
Sabra10G0125800 Salix brachista
SalBow6G1526 Salvia bowleyana
Sc04g0007950 Simmondsia chinensis
Sed0024226 Sechium edule
SEGI_11566 Sequoiadendron giganteum
SEGI_12103 Sequoiadendron giganteum
SEGI_18406 Sequoiadendron giganteum
SEGI_23137 Sequoiadendron giganteum
SEGI_29332 Sequoiadendron giganteum
SEGI_36558 Sequoiadendron giganteum
SEGI_39727 Sequoiadendron giganteum
SGA_v2.0_scaffold25G10746 Striga asiatica
SGA_v2.0_scaffold90G27753 Striga asiatica
SHI20784 Sapria himalayana
Solyc07g017410.3 Solanum lycopersicum
Sopen07g006120 Solanum pennellii
Sp1g22060 Schrenkiella parvula
TAR365G0711 Trochodendron aralioides
TAR496G0001 Trochodendron aralioides
TAR629G1254 Trochodendron aralioides
THA.LOC104818198 Tarenaya hassleriana
Thecc.10G075900 Theobroma cacao
Thhalv10008835m.g Eutrema salsugineum
TPR.G4647 Trifolium pratense
TWI23G0893 Tripterygium wilfordii
TWI59G0657 Tripterygium wilfordii
unitig_749.g14151 Utricularia gibba
vmacro10351 Vaccinium macrocarpon
VMungo1215G2947 Vigna mungo
Zm00001eb076020 Zea mays
Zm00001eb163570 Zea mays

User provided reference genes

Program Settings