Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p11060 Brassica napus
A08p07950 Brassica napus
Aa31LG6G9000 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.1177 Anthoceros agrestis
Actinidia31491 Actinidia chinensis
Ah.03g139490 Amaranthus hybridus
AL1G50930 Arabidopsis lyrata
Aqoxy6G00521 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.232HHD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.S5D643 Arachis hypogaea
AT1G36310 Arabidopsis thaliana
ATR0564G365 Amborella trichopoda
Atru.chr13.1289 Acer truncatum
AUR62022337 Chenopodium quinoa
AUR62033704 Chenopodium quinoa
AUR62034370 Chenopodium quinoa
AUR62036786 Chenopodium quinoa
BcaB03g13642 Brassica carinata
BcaC02g11530 Brassica carinata
BcaC07g37496 Brassica carinata
BolC4t23021H Brassica oleracea
BolC8t47816H Brassica oleracea
BraA05t20051Z Brassica rapa
BraA08t32817Z Brassica rapa
C04p14350 Brassica napus
CAN.G617.12 Capsicum annuum
CANSAT54G1848 Cannabis sativa
CARHR034970 Cardamine hirsuta
Carub.0001s3363 Capsella rubella
Ca_26314_v3 Cicer arietinum L.
CBR_g15981 Chara braunii
Cc10_g05970 Coffea canephora
CDE02G3063 Ceratophyllum demersum
Cfa015937 Carpinus fangiana
Ciclev10001407m.g Citrus clementina
CiPaw.06G023200 Carya illinoinensis
ClCG11G007980 Citrullus lanatus
ClCG11G007990 Citrullus lanatus
COL.COLO4_16503 Corchorus olitorius
Cpa.g.sc77.98 Carica papaya
Cre04.g224002 Chlamydomonas reinhardtii
CsaV3_2G033630 Cucumis sativus L.
DCAR_023858 Daucus carota
Dinv13059 Davidia involucrata
Dinv44727 Davidia involucrata
Duzib041G0715 Durio zibethinus
Duzib093G0733 Durio zibethinus
EL10Ac1g01697 Beta vulgaris
Eucgr.H00927 Eucalyptus grandis
FAN04G2261 Fragaria x ananassa
FAN08G3477 Fragaria x ananassa
FAN13G1502 Fragaria x ananassa
FAN18G3314 Fragaria x ananassa
FvH4_5g38270 Fragaria vesca
Glyma.04G107300 Glycine max
Glyma.06G107100 Glycine max
Gohir.A06G039700 Gossypium hirsutum
Gohir.D06G040600 Gossypium hirsutum
Gorai.010G045400 Gossypium raimondii
GSVIVG01008967001 Vitis vinifera
HanXRQChr02g0043751 Helianthus annuus
Haze_00548 Corylus avellana
Hma1.2p1_0276F.1_g111370 Hydrangea macrophylla
Hma1.2p1_0276F.1_g111380 Hydrangea macrophylla
HPP92_001925 Vanilla planifolia
Lalb_Chr17g0344051 Lupinus albus
Lj1g0011675 Lotus japonicus
Lj3A845G93 Lonicera japonica
Lj3C845T19 Lonicera japonica
Lsat_1_v5_gn_1_3980 Lactuca sativa
Manes.02G212400 Manihot esculenta
Mapoly0189s0001 Marchantia polymorpha
MBI02_g34268_MAGBIO Magnolia biondii
MCO14G461 Micromonas commoda
MD08G1174900 Malus domestica
MD15G1361600 Malus domestica
Medtr2g460880 Medicago truncatula
MELO3C008135.2 Cucumis melo
Migut.N03156 Erythranthe guttata
MSTRG.24247 Avicennia marina
Nitab4.5_0001915g0120 Nicotiana tabacum
Nitab4.5_0002561g0060 Nicotiana tabacum
Nitab4.5_0003428g0020 Nicotiana tabacum
Nn5g28978 Nelumbo nucifera
Oeu017307.1 Olea europaea
Oeu020872.1 Olea europaea
Os02g0750500 Oryza sativa ssp. japonica
Peaxi162Scf00756g00436 Petunia axillaris
PGR042G1365 Punica granatum
Phvul.009G027100 Phaseolus vulgaris
Potri.002G091300 Populus trichocarpa
Pp3c8_16200 Physcomitrium patens
PRCOL_00005291 Prasinoderma coloniale
Prupe.1G509000 Prunus persica
Psat5g135960 Pisum sativum
PSO447G0033 Papaver somniferum
PSO541G3947 Papaver somniferum
PSO675G0151 Papaver somniferum
QL12p035629 Quercus lobata
RcHm_v2.0_Chr7g0240261 Rosa chinensis
Rhsim07G0199400 Rhododendron simsii
Rhsim10G0118000 Rhododendron simsii
Rhsim13G0124000 Rhododendron simsii
RhsimUnG0073100 Rhododendron simsii
Sabra02G0072100 Salix brachista
SalBow8G1448 Salvia bowleyana
Sc14g0001090 Simmondsia chinensis
Sed0017821 Sechium edule
SEGI_02326 Sequoiadendron giganteum
SGA_v2.0_scaffold12G05968 Striga asiatica
SHI20620 Sapria himalayana
SHI32317 Sapria himalayana
SHI34844 Sapria himalayana
SHI34852 Sapria himalayana
SHI35611 Sapria himalayana
SHI41608 Sapria himalayana
SHI43763 Sapria himalayana
SHI46120 Sapria himalayana
SHI49044 Sapria himalayana
SHI49977 Sapria himalayana
SHI50342 Sapria himalayana
SHI51067 Sapria himalayana
SHI51747 Sapria himalayana
SHI52089 Sapria himalayana
SHI52923 Sapria himalayana
SHI53189 Sapria himalayana
SHI53236 Sapria himalayana
SHI53472 Sapria himalayana
SHI54958 Sapria himalayana
SMO361G0461 Selaginella moellendorffii
Solyc04g072390.3 Solanum lycopersicum
Sopen04g028560 Solanum pennellii
Sp1g30710 Schrenkiella parvula
TAR625G1239 Trochodendron aralioides
THA.LOC104813129 Tarenaya hassleriana
Thecc.08G114100 Theobroma cacao
Thhalv10004311m.g Eutrema salsugineum
TPR.G16249 Trifolium pratense
TWI36G1273 Tripterygium wilfordii
TWI56G1213 Tripterygium wilfordii
unitig_22.g6794 Utricularia gibba
vmacro04773 Vaccinium macrocarpon
VMungo1309G2277 Vigna mungo
Zm00001eb255040 Zea mays

User provided reference genes

Program Settings