Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p08050 Brassica napus
A10p16150 Brassica napus
Aa31LG3G13860 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.4055 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.4069 Anthoceros agrestis
Actinidia04287 Actinidia chinensis
Actinidia38337 Actinidia chinensis
Ah.11g045050 Amaranthus hybridus
AL8G34120 Arabidopsis lyrata
Aqoxy3G00834 Aquilegia oxysepala
AT5G58020 Arabidopsis thaliana
ATR0579G027 Amborella trichopoda
ATR0739G050 Amborella trichopoda
Atru.chr13.1961 Acer truncatum
Atru.chr6.1391 Acer truncatum
Atru.chr7.58 Acer truncatum
AUR62021106 Chenopodium quinoa
AUR62031434 Chenopodium quinoa
BcaB05g22395 Brassica carinata
BcaC04g19916 Brassica carinata
BolC2t07483H Brassica oleracea
BolC3t13905H Brassica oleracea
BolC9t57839H Brassica oleracea
BraA02t05877Z Brassica rapa
BraA10t43614Z Brassica rapa
C02p13690 Brassica napus
C09p49880 Brassica napus
CAN.G1116.9 Capsicum annuum
CARHR271830 Cardamine hirsuta
Carub.0008s1857 Capsella rubella
Ca_21113_v3 Cicer arietinum L.
CBR_g37538 Chara braunii
CBR_g44540 Chara braunii
Cc06_g15200 Coffea canephora
CDE02G0414 Ceratophyllum demersum
Cfa020845 Carpinus fangiana
Cfa026666 Carpinus fangiana
Ciclev10008691m.g Citrus clementina
CiPaw.15G174600 Carya illinoinensis
CiPaw.16G114800 Carya illinoinensis
ClCG06G012260 Citrullus lanatus
ClCG06G015480 Citrullus lanatus
COL.COLO4_18779 Corchorus olitorius
Cpa.g.sc46.130 Carica papaya
Cre03.g150650 Chlamydomonas reinhardtii
Cre17.g715950 Chlamydomonas reinhardtii
CsaV3_1G028770 Cucumis sativus L.
CSS0012073 Camellia sinensis var. sinensis
DCAR_020883 Daucus carota
Dinv42879 Davidia involucrata
Dinv43221 Davidia involucrata
Duzib150G0891 Durio zibethinus
Duzib168G1964 Durio zibethinus
ECA233G0390 Erigeron canadensis
EL10Ac8g18850 Beta vulgaris
Eucgr.C02595 Eucalyptus grandis
FAN19G1826 Fragaria x ananassa
FAN23G1120 Fragaria x ananassa
FAN26G1108 Fragaria x ananassa
FAN28G1391 Fragaria x ananassa
FvH4_1g01150 Fragaria vesca
Glyma.02G202400 Glycine max
Glyma.17G075400 Glycine max
Gohir.A07G026501 Gossypium hirsutum
Gohir.A13G184700 Gossypium hirsutum
Gohir.D07G030400 Gossypium hirsutum
Gohir.D09G249000 Gossypium hirsutum
Gohir.D13G191100 Gossypium hirsutum
Gorai.001G031600 Gossypium raimondii
Gorai.006G273400 Gossypium raimondii
Gorai.011G083100 Gossypium raimondii
Gorai.013G217000 Gossypium raimondii
GSVIVG01023592001 Vitis vinifera
HanXRQChr09g0262911 Helianthus annuus
HanXRQChr13g0397631 Helianthus annuus
Haze_19232 Corylus avellana
Hma1.2p1_0028F.1_g017400 Hydrangea macrophylla
HPP92_018747 Vanilla planifolia
HPP92_018748 Vanilla planifolia
Lalb_Chr12g0198621 Lupinus albus
Lalb_Chr13g0300941 Lupinus albus
Lj4g0015138 Lotus japonicus
Lj7P455T24 Lonicera japonica
Lsat_1_v5_gn_6_38260 Lactuca sativa
Manes.14G111500 Manihot esculenta
Mapoly0043s0023 Marchantia polymorpha
MBI14_g37102_MAGBIO Magnolia biondii
MCO05G557 Micromonas commoda
MD15G1155100 Malus domestica
Medtr4g131190 Medicago truncatula
MELO3C004727.2 Cucumis melo
MELO3C010238.2 Cucumis melo
Migut.J01331 Erythranthe guttata
MSTRG.6120 Avicennia marina
Nitab4.5_0001201g0060 Nicotiana tabacum
Nitab4.5_0008157g0020 Nicotiana tabacum
Oeu050475.1 Olea europaea
Oeu051690.1 Olea europaea
Os06g0183900 Oryza sativa ssp. japonica
Peaxi162Scf00347g00088 Petunia axillaris
PGR102G1636 Punica granatum
PGSC0003DMG400003180 Solanum tuberosum
Phvul.003G157300 Phaseolus vulgaris
Potri.006G186900 Populus trichocarpa
Potri.018G109800 Populus trichocarpa
Pp3c14_10930 Physcomitrium patens
PRCOL_00003864 Prasinoderma coloniale
Prupe.7G260500 Prunus persica
Psat4g008640 Pisum sativum
PSO017G5909 Papaver somniferum
PSO170G6608 Papaver somniferum
QL02p092738 Quercus lobata
RcHm_v2.0_Chr2g0085941 Rosa chinensis
Rhsim01G0035700 Rhododendron simsii
Rhsim01G0036000 Rhododendron simsii
Rhsim01G0045600 Rhododendron simsii
RhsimUnG0040000 Rhododendron simsii
Sabra06G0141800 Salix brachista
Sabra06G0142800 Salix brachista
Sabra18G0092700 Salix brachista
SalBow1G8640 Salvia bowleyana
Sc18g0000130 Simmondsia chinensis
Sed0012515 Sechium edule
SEGI_13576 Sequoiadendron giganteum
SGA_v2.0_scaffold265G46122 Striga asiatica
SGA_v2.0_scaffold45G17044 Striga asiatica
SHI04751 Sapria himalayana
SMO307G0072 Selaginella moellendorffii
Solyc07g005340.2 Solanum lycopersicum
Sopen07g001450 Solanum pennellii
Sp6g19700 Schrenkiella parvula
TAR383G0874 Trochodendron aralioides
TAR625G0635 Trochodendron aralioides
TAR625G1225 Trochodendron aralioides
THA.LOC104817826 Tarenaya hassleriana
THA.LOC104817828 Tarenaya hassleriana
Thecc.09G033300 Theobroma cacao
Thhalv10013961m.g Eutrema salsugineum
TPR.G9269 Trifolium pratense
TWI34G1822 Tripterygium wilfordii
unitig_0.g2819 Utricularia gibba
unitig_747.g21900 Utricularia gibba
VMungo1215G1942 Vigna mungo
Zm00001eb158280 Zea mays

User provided reference genes

Program Settings