Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p12780 Brassica napus
A08p31260 Brassica napus
Aa31LG7G1300 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.1403 Anthoceros agrestis
Actinidia01232 Actinidia chinensis
Ah.08g215410 Amaranthus hybridus
AL1G29040 Arabidopsis lyrata
Aqoxy2G00760 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0U7N6T Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.R5QLIS Arachis hypogaea
AT1G16870 Arabidopsis thaliana
ATR0681G175 Amborella trichopoda
Atru.chr1.2577 Acer truncatum
AUR62009714 Chenopodium quinoa
AUR62036231 Chenopodium quinoa
BcaB02g06669 Brassica carinata
BcaC05g25543 Brassica carinata
BcaC07g38819 Brassica carinata
BolC5t30224H Brassica oleracea
BolC8t49383H Brassica oleracea
BraA06t24438Z Brassica rapa
BraA08t35049Z Brassica rapa
C05p15090 Brassica napus
C08p17580 Brassica napus
CAN.G1095.26 Capsicum annuum
CAN.G1095.27 Capsicum annuum
CAN.G1538.6 Capsicum annuum
CAN.G403.12 Capsicum annuum
CANSAT54G1230 Cannabis sativa
CARHR017340 Cardamine hirsuta
Carub.0001s1661 Capsella rubella
Ca_15017_v3 Cicer arietinum L.
CBR_g40648 Chara braunii
Cc01_g14990 Coffea canephora
CDE06G2080 Ceratophyllum demersum
Cfa011791 Carpinus fangiana
Ciclev10001075m.g Citrus clementina
CiPaw.13G067700 Carya illinoinensis
CiPaw.14G053300 Carya illinoinensis
ClCG03G000160 Citrullus lanatus
COL.COLO4_11171 Corchorus olitorius
Cpa.g.sc53.44 Carica papaya
Cre03.g176700 Chlamydomonas reinhardtii
CsaV3_1G036740 Cucumis sativus L.
CsaV3_6G022490 Cucumis sativus L.
CSS0008764 Camellia sinensis var. sinensis
CSS0033097 Camellia sinensis var. sinensis
CSS0045112 Camellia sinensis var. sinensis
DCAR_028395 Daucus carota
Dinv09684 Davidia involucrata
Dinv12244 Davidia involucrata
Dinv28705 Davidia involucrata
Duzib168G0041 Durio zibethinus
ECA247G3025 Erigeron canadensis
EL10Ac7g15872 Beta vulgaris
Eucgr.B04012 Eucalyptus grandis
FAN11G2675 Fragaria x ananassa
FAN16G1300 Fragaria x ananassa
FAN21G1740 Fragaria x ananassa
FAN25G3091 Fragaria x ananassa
FvH4_3g39930 Fragaria vesca
Glyma.11G163000 Glycine max
Glyma.18G056300 Glycine max
Gohir.A08G203600 Gossypium hirsutum
Gohir.D08G220900 Gossypium hirsutum
Gorai.004G234600 Gossypium raimondii
GSVIVG01024619001 Vitis vinifera
HanXRQChr08g0228541 Helianthus annuus
Haze_24429 Corylus avellana
HPP92_014227 Vanilla planifolia
HPP92_014228 Vanilla planifolia
HPP92_026488 Vanilla planifolia
Hund19201 Selenicereus undatus
Lalb_Chr18g0051461 Lupinus albus
Lj2C1095G3 Lonicera japonica
Lj2g0010469 Lotus japonicus
Lj2g0020421 Lotus japonicus
Lj6g0021320 Lotus japonicus
Lsat_1_v5_gn_3_115920 Lactuca sativa
Lsat_1_v5_gn_3_46621 Lactuca sativa
Lsat_1_v5_gn_3_46641 Lactuca sativa
Lsat_1_v5_gn_7_20901 Lactuca sativa
Lsat_1_v5_gn_9_14481 Lactuca sativa
Manes.18G136600 Manihot esculenta
Mapoly0019s0020 Marchantia polymorpha
MBI18_g09779_MAGBIO Magnolia biondii
MCO01G624 Micromonas commoda
MD03G1058000 Malus domestica
MD11G1060300 Malus domestica
Medtr3g031280 Medicago truncatula
MELO3C020493.2 Cucumis melo
Migut.D00841 Erythranthe guttata
MSTRG.21245 Avicennia marina
Nitab4.5_0002494g0040 Nicotiana tabacum
Nitab4.5_0002768g0050 Nicotiana tabacum
Nitab4.5_0015019g0010 Nicotiana tabacum
Nn6g33319 Nelumbo nucifera
Os07g0202900 Oryza sativa ssp. japonica
Peaxi162Scf00390g00538 Petunia axillaris
PGR102G1249 Punica granatum
PGSC0003DMG400030379 Solanum tuberosum
Phvul.006G074900 Phaseolus vulgaris
Potri.013G153900 Populus trichocarpa
Pp3c11_22290 Physcomitrium patens
PRCOL_00003540 Prasinoderma coloniale
Prupe.6G046100 Prunus persica
Psat5g152360 Pisum sativum
PSO339G6698 Papaver somniferum
PSO384G2283 Papaver somniferum
QL01p025810 Quercus lobata
QL01p025812 Quercus lobata
QL04p095946 Quercus lobata
RcHm_v2.0_Chr5g0071911 Rosa chinensis
RcHm_v2.0_Chr5g0071921 Rosa chinensis
Rhsim06G0112000 Rhododendron simsii
Rhsim11G0040500 Rhododendron simsii
Sabra13G0123700 Salix brachista
SalBow1G0607 Salvia bowleyana
SalBow6G4442 Salvia bowleyana
SalBow6G5766 Salvia bowleyana
SalBow6G5836 Salvia bowleyana
Sc21g0004960 Simmondsia chinensis
Sed0015134 Sechium edule
SEGI_17098 Sequoiadendron giganteum
SGA_v2.0_scaffold80G25693 Striga asiatica
SMO353G0383 Selaginella moellendorffii
Solyc06g082370.4 Solanum lycopersicum
Sopen06g033760 Solanum pennellii
Sp1g15010 Schrenkiella parvula
TAR624G0064 Trochodendron aralioides
TAR628G0009 Trochodendron aralioides
TAR628G1613 Trochodendron aralioides
TAR633G1809 Trochodendron aralioides
THA.LOC104812325 Tarenaya hassleriana
THA.LOC104813633 Tarenaya hassleriana
Thecc.09G359400 Theobroma cacao
Thhalv10007506m.g Eutrema salsugineum
TPR.G25689 Trifolium pratense
TWI75G0534 Tripterygium wilfordii
unitig_747.g21452 Utricularia gibba
vmacro00112 Vaccinium macrocarpon
VMungo0540G0790 Vigna mungo
VMungo0540G2447 Vigna mungo
Zm00001eb116240 Zea mays

User provided reference genes

Program Settings