Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p04570 Brassica napus
Aa31LG11G11610 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_340.475 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_340.476 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.314 Anthoceros agrestis
Actinidia21524 Actinidia chinensis
Ah.12g060700 Amaranthus hybridus
Ah.12g064660 Amaranthus hybridus
Ah.15g100130 Amaranthus hybridus
Ah.15g100140 Amaranthus hybridus
AL6G29030 Arabidopsis lyrata
Aqoxy1G00543 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.B386PI Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DQ02GG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JQ1SRI Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YCKM6W Arachis hypogaea
AT5G17930 Arabidopsis thaliana
ATR0697G033 Amborella trichopoda
Atru.chr2.1463 Acer truncatum
Atru.ctg1436.26 Acer truncatum
AUR62036264 Chenopodium quinoa
AUR62039715 Chenopodium quinoa
BcaB05g23293 Brassica carinata
BolC2t06856H Brassica oleracea
BraA02t05418Z Brassica rapa
C02p09500 Brassica napus
CAN.G231.14 Capsicum annuum
CAN.G531.12 Capsicum annuum
CAN.G732.36 Capsicum annuum
CANSAT35G0669 Cannabis sativa
CARHR195170 Cardamine hirsuta
Carub.0006s1614 Capsella rubella
Ca_08293_v3 Cicer arietinum L.
Ca_29914_v3 Cicer arietinum L.
CBR_g51831 Chara braunii
Cc06_g07290 Coffea canephora
CDE10G0660 Ceratophyllum demersum
Cfa005496 Carpinus fangiana
Cfa005497 Carpinus fangiana
Cfa017688 Carpinus fangiana
Ciclev10018934m.g Citrus clementina
CiPaw.09G164800 Carya illinoinensis
ClCG04G005430 Citrullus lanatus
COL.COLO4_28604 Corchorus olitorius
COL.COLO4_28605 Corchorus olitorius
Cpa.g.sc56.49 Carica papaya
Cre09.g415200 Chlamydomonas reinhardtii
CsaV3_4G012150 Cucumis sativus L.
CSS0043158 Camellia sinensis var. sinensis
DCAR_003248 Daucus carota
Dinv05572 Davidia involucrata
Dinv11935 Davidia involucrata
Duzib177G0708 Durio zibethinus
ECA232G0672 Erigeron canadensis
EL10Ac5g11757 Beta vulgaris
Eucgr.A02125 Eucalyptus grandis
FAN15G1561 Fragaria x ananassa
FAN24G1403 Fragaria x ananassa
FAN27G2011 Fragaria x ananassa
FAN27G2161 Fragaria x ananassa
FvH4_2g11600 Fragaria vesca
Glyma.16G038400 Glycine max
Glyma.19G114400 Glycine max
Gohir.A11G232100 Gossypium hirsutum
Gohir.D11G243400 Gossypium hirsutum
Gorai.007G258400 Gossypium raimondii
GSVIVG01027853001 Vitis vinifera
GSVIVG01029949001 Vitis vinifera
HanXRQChr02g0058981 Helianthus annuus
HanXRQChr12g0354211 Helianthus annuus
Haze_20460 Corylus avellana
Hma1.2p1_0768F.1_g215590 Hydrangea macrophylla
Hma1.2p1_0768F.1_g215600 Hydrangea macrophylla
Hma1.2p1_0768F.1_g215610 Hydrangea macrophylla
HPP92_025446 Vanilla planifolia
Hund03701 Selenicereus undatus
Hund15057 Selenicereus undatus
Lalb_Chr10g0095341 Lupinus albus
Lj1g0008743 Lotus japonicus
Lj1g0012853 Lotus japonicus
Lj4C106T9 Lonicera japonica
Lsat_1_v5_gn_9_60281 Lactuca sativa
Manes.08G154800 Manihot esculenta
Mapoly0135s0015 Marchantia polymorpha
MBI05_g13905_MAGBIO Magnolia biondii
MBI05_g42570_MAGBIO Magnolia biondii
MCO03G302 Micromonas commoda
MD12G1008000 Malus domestica
Medtr7g086290 Medicago truncatula
MELO3C008815.2 Cucumis melo
Migut.J00763 Erythranthe guttata
MSTRG.19351 Avicennia marina
Nitab4.5_0000098g0070 Nicotiana tabacum
Nitab4.5_0000098g0080 Nicotiana tabacum
Nitab4.5_0001606g0020 Nicotiana tabacum
Nitab4.5_0010527g0010 Nicotiana tabacum
Nn1g06286 Nelumbo nucifera
Oeu044649.1 Olea europaea
Os05g0147150 Oryza sativa ssp. japonica
Os05g0147200 Oryza sativa ssp. japonica
Peaxi162Scf00117g00415 Petunia axillaris
PGR042G1596 Punica granatum
PGR042G3559 Punica granatum
PGSC0003DMG400038555 Solanum tuberosum
Phvul.001G113700 Phaseolus vulgaris
Potri.013G061400 Populus trichocarpa
Pp3c3_21680 Physcomitrium patens
Pp3c3_21687 Physcomitrium patens
PRCOL_00000790 Prasinoderma coloniale
Prupe.1G541500 Prunus persica
Psat3g087120 Pisum sativum
Psat5g302960 Pisum sativum
PSO339G0351 Papaver somniferum
PSO384G0627 Papaver somniferum
QL07p027173 Quercus lobata
QL12p013649 Quercus lobata
RcHm_v2.0_Chr5g0003011 Rosa chinensis
RcHm_v2.0_Chr5g0003131 Rosa chinensis
RcHm_v2.0_Chr6g0270841 Rosa chinensis
Rhsim08G0079300 Rhododendron simsii
Sabra13G0054300 Salix brachista
SalBow3G0128 Salvia bowleyana
Sc10g0005500 Simmondsia chinensis
Sed0016053 Sechium edule
SEGI_02339 Sequoiadendron giganteum
SEGI_02385 Sequoiadendron giganteum
SEGI_10502 Sequoiadendron giganteum
SEGI_16290 Sequoiadendron giganteum
SEGI_31243 Sequoiadendron giganteum
SGA_v2.0_scaffold31G12800 Striga asiatica
SMO172G0149 Selaginella moellendorffii
Solyc03g097280.4 Solanum lycopersicum
Sopen03g028050 Solanum pennellii
Sp6g26340 Schrenkiella parvula
TAR362G1082 Trochodendron aralioides
THA.LOC104802876 Tarenaya hassleriana
Thecc.05G245000 Theobroma cacao
Thhalv10012737m.g Eutrema salsugineum
TPR.G17857 Trifolium pratense
TPR.G36393 Trifolium pratense
TWI31G1180 Tripterygium wilfordii
vmacro18109 Vaccinium macrocarpon
VMungo1383G2809 Vigna mungo
Zm00001eb417990 Zea mays

User provided reference genes

Program Settings