Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p11960 Brassica napus
A02p28470 Brassica napus
A03p52380 Brassica napus
A06p47070 Brassica napus
A09p21180 Brassica napus
Aa31LG6G2690 Aethionema arabicum
Aa31LG9G8540 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2481 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_117.2482 Anthoceros agrestis
Ah.15g091820 Amaranthus hybridus
AL7G33640 Arabidopsis lyrata
arahy.Tifrunner.gnm1.ann1.98CSRD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QDE700 Arachis hypogaea
AT4G20260 Arabidopsis thaliana
ATR0737G015 Amborella trichopoda
Atru.chr10.203 Acer truncatum
AUR62040985 Chenopodium quinoa
AUR62042105 Chenopodium quinoa
BcaB07g30517 Brassica carinata
BcaB07g30940 Brassica carinata
BcaC04g21824 Brassica carinata
BcaC06g30648 Brassica carinata
BcaC06g34533 Brassica carinata
BcaC09g51326 Brassica carinata
BcaNung03497 Brassica carinata
BcaNung03716 Brassica carinata
BolC1t01388H Brassica oleracea
BolC2t10548H Brassica oleracea
BolC7t43278H Brassica oleracea
BolC7t45581H Brassica oleracea
BolC9t55584H Brassica oleracea
BraA01t01138Z Brassica rapa
BraA02t07882Z Brassica rapa
BraA03t14315Z Brassica rapa
BraA06t27579Z Brassica rapa
BraA09t37724Z Brassica rapa
C01p14230 Brassica napus
C02p45090 Brassica napus
C07p27480 Brassica napus
C07p50830 Brassica napus
C09p27010 Brassica napus
CAN.G465.5 Capsicum annuum
CANSAT35G0328 Cannabis sativa
CARHR227090 Cardamine hirsuta
Carub.0007s2091 Capsella rubella
Ca_02405_v3 Cicer arietinum L.
Cc09_g04590 Coffea canephora
CDE02G1470 Ceratophyllum demersum
CDE09G1225 Ceratophyllum demersum
CDE10G0480 Ceratophyllum demersum
CDE10G1097 Ceratophyllum demersum
Ciclev10016618m.g Citrus clementina
CiPaw.09G140800 Carya illinoinensis
CiPaw.10G108500 Carya illinoinensis
COL.COLO4_25022 Corchorus olitorius
Cpa.g.sc30.65 Carica papaya
CSS0003949 Camellia sinensis var. sinensis
CSS0021462 Camellia sinensis var. sinensis
DCAR_003732 Daucus carota
Dinv07938 Davidia involucrata
Dinv18415 Davidia involucrata
ECA232G1901 Erigeron canadensis
ECA238G2220 Erigeron canadensis
EL10Ac7g17298 Beta vulgaris
Eucgr.D00001 Eucalyptus grandis
FAN11G1371 Fragaria x ananassa
FAN16G0515 Fragaria x ananassa
FAN21G0853 Fragaria x ananassa
FAN25G0981 Fragaria x ananassa
FAN25G1093 Fragaria x ananassa
FvH4_3g13370 Fragaria vesca
Glyma.09G047200 Glycine max
Glyma.15G154700 Glycine max
GSVIVG01001340001 Vitis vinifera
HanXRQChr09g0257711 Helianthus annuus
HanXRQChr14g0439031 Helianthus annuus
HanXRQChr15g0487481 Helianthus annuus
Haze_05185 Corylus avellana
Hma1.2p1_0082F.1_g042560 Hydrangea macrophylla
HPP92_008810 Vanilla planifolia
Hund20133 Selenicereus undatus
Lalb_Chr15g0083621 Lupinus albus
Lalb_Chr18g0051841 Lupinus albus
Lalb_Chr20g0114421 Lupinus albus
Lj6g0014214 Lotus japonicus
Lsat_1_v5_gn_2_59820 Lactuca sativa
Lsat_1_v5_gn_8_107621 Lactuca sativa
Lsat_1_v5_gn_8_30141 Lactuca sativa
Lsat_1_v5_gn_9_9820 Lactuca sativa
Manes.16G060225 Manihot esculenta
Mapoly0087s0006 Marchantia polymorpha
MBI06_g04184_MAGBIO Magnolia biondii
MBI06_g26562_MAGBIO Magnolia biondii
MBI07_g42840_MAGBIO Magnolia biondii
MBI07_g44405_MAGBIO Magnolia biondii
MD05G1242300 Malus domestica
MD10G1224100 Malus domestica
Medtr2g437530 Medicago truncatula
Migut.L00006 Erythranthe guttata
MSTRG.14820 Avicennia marina
Nitab4.5_0000217g0040 Nicotiana tabacum
Nitab4.5_0001253g0020 Nicotiana tabacum
Nitab4.5_0004778g0020 Nicotiana tabacum
Nitab4.5_0012748g0020 Nicotiana tabacum
Nn1g09867 Nelumbo nucifera
Oeu005126.1 Olea europaea
Oeu052922.1 Olea europaea
Os01g0233000 Oryza sativa ssp. japonica
Os02g0285300 Oryza sativa ssp. japonica
Peaxi162Scf00888g00114 Petunia axillaris
Peaxi162Scf01310g00311 Petunia axillaris
PGSC0003DMG400011293 Solanum tuberosum
Phvul.009G245700 Phaseolus vulgaris
Potri.001G073900 Populus trichocarpa
Potri.003G157100 Populus trichocarpa
Prupe.4G121100 Prunus persica
Psat1g152160 Pisum sativum
PSO541G2657 Papaver somniferum
PSO675G8904 Papaver somniferum
QL11p010746 Quercus lobata
RcHm_v2.0_Chr5g0022081 Rosa chinensis
Rhsim13G0136300 Rhododendron simsii
Sabra01G0052200 Salix brachista
Sabra03G0114000 Salix brachista
SalBow7G1744 Salvia bowleyana
Sc17g0004300 Simmondsia chinensis
Solyc10g005100.3 Solanum lycopersicum
Sopen10g001120 Solanum pennellii
Sp2g09430 Schrenkiella parvula
Sp7g18620 Schrenkiella parvula
TAR624G1249 Trochodendron aralioides
TAR626G1126 Trochodendron aralioides
THA.LOC104811953 Tarenaya hassleriana
THA.LOC104812925 Tarenaya hassleriana
Thecc.02G000700 Theobroma cacao
Thhalv10026094m.g Eutrema salsugineum
TPR.G31382 Trifolium pratense
TWI63G0333 Tripterygium wilfordii
vmacro03574 Vaccinium macrocarpon
VMungo1309G1298 Vigna mungo
Zm00001eb119130 Zea mays
Zm00001eb236850 Zea mays
Zm00001eb339340 Zea mays
Zm00001eb381370 Zea mays

User provided reference genes

Program Settings