Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A10p28550 Brassica napus
Aa31LG3G18420 Aethionema arabicum
Actinidia04794 Actinidia chinensis
Actinidia04795 Actinidia chinensis
Actinidia10441 Actinidia chinensis
Ah.02g114240 Amaranthus hybridus
Ah.11g047400 Amaranthus hybridus
AL6G18490 Arabidopsis lyrata
Aqoxy3G00549 Aquilegia oxysepala
Aqoxy3G03749 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.399KXC Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.4B3W67 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TSF3K2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.U6KDHT Arachis hypogaea
AT5G08120 Arabidopsis thaliana
ATR0691G224 Amborella trichopoda
Atru.chr4.1592 Acer truncatum
AUR62032138 Chenopodium quinoa
AUR62039667 Chenopodium quinoa
BcaB05g21579 Brassica carinata
BcaB08g37285 Brassica carinata
BolC9t59630H Brassica oleracea
BraA10t44904Z Brassica rapa
C09p68830 Brassica napus
CAN.G982.39 Capsicum annuum
CANSAT80G0823 Cannabis sativa
CARHR205070 Cardamine hirsuta
Carub.0006s0700 Capsella rubella
Ca_21755_v3 Cicer arietinum L.
Cc04_g08280 Coffea canephora
CDE02G3817 Ceratophyllum demersum
CDE05G1733 Ceratophyllum demersum
Cfa017731 Carpinus fangiana
Ciclev10020920m.g Citrus clementina
CiPaw.16G080100 Carya illinoinensis
ClCG04G011560 Citrullus lanatus
COL.COLO4_27496 Corchorus olitorius
Cpa.g.sc3.232 Carica papaya
CsaV3_1G006260 Cucumis sativus L.
CSS0036905 Camellia sinensis var. sinensis
DCAR_010175 Daucus carota
Dinv17459 Davidia involucrata
Dinv38642 Davidia involucrata
Duzib068G0534 Durio zibethinus
Duzib132G0740 Durio zibethinus
Duzib205G1609 Durio zibethinus
ECA246G0831 Erigeron canadensis
EL10Ac5g11189 Beta vulgaris
Eucgr.K02550 Eucalyptus grandis
FAN08G1625 Fragaria x ananassa
FAN13G1214 Fragaria x ananassa
FAN18G4071 Fragaria x ananassa
FvH4_5g13401 Fragaria vesca
Glyma.04G159100 Glycine max
Glyma.05G018200 Glycine max
Glyma.17G081700 Glycine max
Gohir.A07G058832 Gossypium hirsutum
Gohir.A09G243900 Gossypium hirsutum
Gohir.D07G063700 Gossypium hirsutum
Gohir.D09G244600 Gossypium hirsutum
Gohir.D13G101706 Gossypium hirsutum
Gorai.001G067300 Gossypium raimondii
Gorai.006G268700 Gossypium raimondii
GSVIVG01008154001 Vitis vinifera
HanXRQChr02g0051141 Helianthus annuus
HanXRQChr05g0157441 Helianthus annuus
Haze_18511 Corylus avellana
Hma1.2p1_0060F.1_g032740 Hydrangea macrophylla
HPP92_015550 Vanilla planifolia
HPP92_019902 Vanilla planifolia
Hund02544 Selenicereus undatus
Hund09956 Selenicereus undatus
Lalb_Chr13g0302681 Lupinus albus
Lj1g0009577 Lotus japonicus
Lj4g0025893 Lotus japonicus
Lj9C438G4 Lonicera japonica
Lsat_1_v5_gn_5_23380 Lactuca sativa
Manes.06G080800 Manihot esculenta
Manes.14G089100 Manihot esculenta
Mapoly0022s0044 Marchantia polymorpha
MBI14_g08108_MAGBIO Magnolia biondii
MD06G1205700 Malus domestica
MD14G1216600 Malus domestica
Medtr4g109960 Medicago truncatula
MELO3C002054.2 Cucumis melo
Migut.D01615 Erythranthe guttata
MSTRG.9581 Avicennia marina
Nitab4.5_0001797g0020 Nicotiana tabacum
Nitab4.5_0002041g0040 Nicotiana tabacum
Nitab4.5_0002467g0110 Nicotiana tabacum
Nitab4.5_0005994g0050 Nicotiana tabacum
Nn3g17535 Nelumbo nucifera
Nn4g23536 Nelumbo nucifera
Nn4g23537 Nelumbo nucifera
Oeu014427.1 Olea europaea
Oeu014549.1 Olea europaea
Oeu051243.1 Olea europaea
Os06g0284800 Oryza sativa ssp. japonica
Os09g0476000 Oryza sativa ssp. japonica
Peaxi162Scf00017g03254 Petunia axillaris
Peaxi162Scf00091g00143 Petunia axillaris
Peaxi162Scf00365g00114 Petunia axillaris
PGR044G0085 Punica granatum
PGSC0003DMG400024524 Solanum tuberosum
Phvul.003G182200 Phaseolus vulgaris
Potri.004G107000 Populus trichocarpa
Prupe.5G210000 Prunus persica
Prupe.8G074000 Prunus persica
Psat4g046080 Pisum sativum
PSO017G7367 Papaver somniferum
PSO063G4277 Papaver somniferum
PSO063G5368 Papaver somniferum
PSO478G2666 Papaver somniferum
PSO782G3834 Papaver somniferum
QL10p020742 Quercus lobata
RcHm_v2.0_Chr7g0183731 Rosa chinensis
Rhsim08G0142100 Rhododendron simsii
Sabra04G0074900 Salix brachista
SalBow7G2030 Salvia bowleyana
Sc04g0003900 Simmondsia chinensis
Sed0023471 Sechium edule
SEGI_36320 Sequoiadendron giganteum
SGA_v2.0_scaffold65G22104 Striga asiatica
SHI17413 Sapria himalayana
SMO143G0201 Selaginella moellendorffii
Solyc03g114760.3 Solanum lycopersicum
Sopen03g033840 Solanum pennellii
Sp6g34840 Schrenkiella parvula
TAR371G0033 Trochodendron aralioides
THA.LOC104818357 Tarenaya hassleriana
Thecc.03G108400 Theobroma cacao
Thhalv10014100m.g Eutrema salsugineum
TPR.G1989 Trifolium pratense
TPR.G2086 Trifolium pratense
TPR.G28909 Trifolium pratense
TWI60G1362 Tripterygium wilfordii
TWI81G0215 Tripterygium wilfordii
unitig_578.g15937 Utricularia gibba
unitig_8.g4498 Utricularia gibba
vmacro17641 Vaccinium macrocarpon
VMungo1215G3162 Vigna mungo
Zm00001eb280850 Zea mays
Zm00001eb315970 Zea mays
Zm00001eb380690 Zea mays

User provided reference genes

Program Settings