Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p23880 Brassica napus
Actinidia30446 Actinidia chinensis
Actinidia39337 Actinidia chinensis
Ah.01g003870 Amaranthus hybridus
Ah.09g225920 Amaranthus hybridus
AL4G40790 Arabidopsis lyrata
AL5G39800 Arabidopsis lyrata
Aqoxy1G02205 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.BT5S0A Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MS8YUN Arachis hypogaea
AT2G42370 Arabidopsis thaliana
AT3G58110 Arabidopsis thaliana
ATR0602G272 Amborella trichopoda
Atru.chr3.860 Acer truncatum
Atru.chr6.2836 Acer truncatum
AUR62024070 Chenopodium quinoa
AUR62038992 Chenopodium quinoa
BcaB02g07550 Brassica carinata
BcaB02g07551 Brassica carinata
BcaC08g44896 Brassica carinata
BcaC08g44897 Brassica carinata
BolC6t37670H Brassica oleracea
BraA07t30041Z Brassica rapa
C06p25110 Brassica napus
CAN.G1543.11 Capsicum annuum
CANSAT64G0642 Cannabis sativa
CARHR137420 Cardamine hirsuta
CARHR168460 Cardamine hirsuta
Carub.0005s2496 Capsella rubella
Ca_18900_v3 Cicer arietinum L.
Cc02_g14370 Coffea canephora
Cc05_g08020 Coffea canephora
CDE10G0023 Ceratophyllum demersum
CDE10G0045 Ceratophyllum demersum
CDE10G0522 Ceratophyllum demersum
Cfa014695 Carpinus fangiana
Ciclev10014152m.g Citrus clementina
CiPaw.04G130500 Carya illinoinensis
ClCG02G018020 Citrullus lanatus
COL.COLO4_10076 Corchorus olitorius
COL.COLO4_23697 Corchorus olitorius
COL.COLO4_23698 Corchorus olitorius
Cpa.g.sc209.10 Carica papaya
CsaV3_3G019350 Cucumis sativus L.
CsaV3_6G015240 Cucumis sativus L.
CSS0021355 Camellia sinensis var. sinensis
DCAR_006629 Daucus carota
DCAR_025312 Daucus carota
Dinv03891 Davidia involucrata
Dinv19977 Davidia involucrata
Duzib264G0025 Durio zibethinus
ECA233G0823 Erigeron canadensis
ECA233G3350 Erigeron canadensis
EL10Ac9g20856 Beta vulgaris
Eucgr.A01888 Eucalyptus grandis
FAN09G0613 Fragaria x ananassa
FAN12G1500 Fragaria x ananassa
FAN21G3056 Fragaria x ananassa
FvH4_3g11260 Fragaria vesca
FvH4_6g27000 Fragaria vesca
Glyma.06G284801 Glycine max
Glyma.12G121100 Glycine max
Gohir.A10G153600 Gossypium hirsutum
Gohir.D10G112600 Gossypium hirsutum
Gorai.011G124400 Gossypium raimondii
GSVIVG01020660001 Vitis vinifera
HanXRQChr17g0554751 Helianthus annuus
HanXRQChr17g0560461 Helianthus annuus
Haze_13315 Corylus avellana
Hma1.2p1_0002F.1_g002540 Hydrangea macrophylla
HPP92_005198 Vanilla planifolia
HPP92_024035 Vanilla planifolia
Hund00957 Selenicereus undatus
Lalb_Chr01g0005921 Lupinus albus
Lalb_Chr03g0029811 Lupinus albus
Lalb_Chr19g0134981 Lupinus albus
Lalb_Chr22g0356801 Lupinus albus
Lj3g0023683 Lotus japonicus
Lj8C105T4 Lonicera japonica
Lsat_1_v5_gn_8_137601 Lactuca sativa
Manes.13G138100 Manihot esculenta
MBI06_g25721_MAGBIO Magnolia biondii
MD09G1139300 Malus domestica
MD17G1128800 Malus domestica
Medtr4g079510 Medicago truncatula
MELO3C019743.2 Cucumis melo
Migut.M00189 Erythranthe guttata
Nitab4.5_0002629g0110 Nicotiana tabacum
Nitab4.5_0006823g0030 Nicotiana tabacum
Nn1g09000 Nelumbo nucifera
Oeu000569.1 Olea europaea
Oeu031086.1 Olea europaea
Oeu036088.3 Olea europaea
Os06g0538200 Oryza sativa ssp. japonica
Os07g0113101 Oryza sativa ssp. japonica
Peaxi162Scf00189g00017 Petunia axillaris
PGR042G2390 Punica granatum
PGSC0003DMG400009404 Solanum tuberosum
Phvul.011G116900 Phaseolus vulgaris
Potri.013G119700 Populus trichocarpa
Potri.019G091700 Populus trichocarpa
Prupe.8G044600 Prunus persica
Psat7g166560 Pisum sativum
PSO063G4059 Papaver somniferum
PSO339G1987 Papaver somniferum
PSO384G4553 Papaver somniferum
PSO782G4194 Papaver somniferum
QL08p043062 Quercus lobata
RcHm_v2.0_Chr2g0128861 Rosa chinensis
RcHm_v2.0_Chr4g0423021 Rosa chinensis
RcHm_v2.0_Chr5g0053351 Rosa chinensis
RcHm_v2.0_Chr7g0185071 Rosa chinensis
Rhsim04G0072600 Rhododendron simsii
Sabra13G0101100 Salix brachista
Sabra13G0101200 Salix brachista
Sabra19G0105000 Salix brachista
SalBow7G1067 Salvia bowleyana
Sc12g0003330 Simmondsia chinensis
Sed0004663 Sechium edule
SEGI_35055 Sequoiadendron giganteum
SGA_v2.0_scaffold106G30663 Striga asiatica
SGA_v2.0_scaffold51G18645 Striga asiatica
SGA_v2.0_scaffold51G18646 Striga asiatica
SHI10497 Sapria himalayana
Solyc07g053440.4 Solanum lycopersicum
Sopen07g027400 Solanum pennellii
Sp5g04610 Schrenkiella parvula
TAR316G0002 Trochodendron aralioides
TAR624G1347 Trochodendron aralioides
TAR626G0262 Trochodendron aralioides
TAR627G0756 Trochodendron aralioides
THA.LOC104802250 Tarenaya hassleriana
THA.LOC104822691 Tarenaya hassleriana
Thecc.01G241800 Theobroma cacao
Thhalv10005785m.g Eutrema salsugineum
TPR.G14943 Trifolium pratense
TWI23G1119 Tripterygium wilfordii
TWI59G0121 Tripterygium wilfordii
unitig_62.g23335 Utricularia gibba
unitig_899.g15324 Utricularia gibba
VMungo1127G0185 Vigna mungo
Zm00001eb204940 Zea mays
Zm00001eb238760 Zea mays
Zm00001eb238770 Zea mays

User provided reference genes

Program Settings