Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p12620 Brassica napus
Aa31LG3G13540 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.5641 Anthoceros agrestis
Actinidia24021 Actinidia chinensis
AL8G33730 Arabidopsis lyrata
Aqoxy4G03021 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.4YP8RP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.6LUE8P Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RWXM46 Arachis hypogaea
AT5G57700 Arabidopsis thaliana
ATR0796G313 Amborella trichopoda
Atru.chr7.554 Acer truncatum
AUR62039979 Chenopodium quinoa
AUR62040288 Chenopodium quinoa
BolC3t13925H Brassica oleracea
BraA03t10577Z Brassica rapa
C03p14830 Brassica napus
CANSAT11G2449 Cannabis sativa
CARHR271450 Cardamine hirsuta
Carub.0008s1821 Capsella rubella
Ca_21190_v3 Cicer arietinum L.
CBR_g30241 Chara braunii
Cc06_g13790 Coffea canephora
CDE10G0441 Ceratophyllum demersum
Ciclev10008429m.g Citrus clementina
CiPaw.07G187700 Carya illinoinensis
ClCG06G012960 Citrullus lanatus
COL.COLO4_16078 Corchorus olitorius
COL.COLO4_16080 Corchorus olitorius
Cpa.g.sc450.6 Carica papaya
CsaV3_1G029530 Cucumis sativus L.
CSS0029475 Camellia sinensis var. sinensis
DCAR_014714 Daucus carota
Dinv41292 Davidia involucrata
Dinv42767 Davidia involucrata
Dinv43336 Davidia involucrata
Duzib150G1634 Durio zibethinus
ECA236G3445 Erigeron canadensis
EL10Ac7g17876 Beta vulgaris
EL10Ac8g18254 Beta vulgaris
EL10Ac8g18255 Beta vulgaris
EL10Ac9g22414 Beta vulgaris
Eucgr.C02440 Eucalyptus grandis
FAN07G2217 Fragaria x ananassa
FAN12G0682 Fragaria x ananassa
FAN12G2859 Fragaria x ananassa
FAN17G0752 Fragaria x ananassa
FAN22G1361 Fragaria x ananassa
FvH4_4g09810 Fragaria vesca
Glyma.13G092800 Glycine max
Glyma.13G092900 Glycine max
Glyma.17G067600 Glycine max
Glyma.17G067650 Glycine max
Gohir.A05G345818 Gossypium hirsutum
Gohir.A06G047300 Gossypium hirsutum
Gohir.D04G085700 Gossypium hirsutum
Gohir.D06G047501 Gossypium hirsutum
Gorai.010G053100 Gossypium raimondii
Gorai.012G095700 Gossypium raimondii
HanXRQChr06g0178861 Helianthus annuus
Haze_22151 Corylus avellana
Hma1.2p1_0921F.1_g236680 Hydrangea macrophylla
Hma1.2p1_2604F.1_g325280 Hydrangea macrophylla
HPP92_013485 Vanilla planifolia
HPP92_026039 Vanilla planifolia
Hund09015 Selenicereus undatus
Hund26388 Selenicereus undatus
Lalb_Chr07g0180161 Lupinus albus
Lalb_Chr07g0180171 Lupinus albus
Lj4g0014860 Lotus japonicus
Lj4g0023001 Lotus japonicus
Lj9A730T54 Lonicera japonica
Lsat_1_v5_gn_8_65460 Lactuca sativa
Manes.06G028800 Manihot esculenta
Mapoly0080s0044 Marchantia polymorpha
MBI18_g11928_MAGBIO Magnolia biondii
MBI18_g28946_MAGBIO Magnolia biondii
MBI18_g29570_MAGBIO Magnolia biondii
MBI18_g46216_MAGBIO Magnolia biondii
MBI19_g36862_MAGBIO Magnolia biondii
MD13G1261500 Malus domestica
Medtr4g129180 Medicago truncatula
Medtr4g129200 Medicago truncatula
MELO3C017513.2 Cucumis melo
MELO3C029512.2 Cucumis melo
Migut.J01437 Erythranthe guttata
MSTRG.19688 Avicennia marina
Nitab4.5_0000168g0090 Nicotiana tabacum
Nitab4.5_0000692g0020 Nicotiana tabacum
Nitab4.5_0006743g0030 Nicotiana tabacum
Nn7g37052 Nelumbo nucifera
Nn8g41235 Nelumbo nucifera
Oeu043521.1 Olea europaea
Os07g0516000 Oryza sativa ssp. japonica
Os07g0516050 Oryza sativa ssp. japonica
Peaxi162Scf00014g00192 Petunia axillaris
Peaxi162Scf00078g00547 Petunia axillaris
Peaxi162Scf00339g00098 Petunia axillaris
PGR102G1178 Punica granatum
PGSC0003DMG400012851 Solanum tuberosum
Phvul.003G150000 Phaseolus vulgaris
Phvul.003G150200 Phaseolus vulgaris
Potri.018G097100 Populus trichocarpa
Pp3c3_37310 Physcomitrium patens
Prupe.1G095300 Prunus persica
Psat4g010800 Pisum sativum
Psat4g010840 Pisum sativum
PSO135G0092 Papaver somniferum
PSO135G0552 Papaver somniferum
PSO135G0726 Papaver somniferum
PSO384G1775 Papaver somniferum
PSO384G2580 Papaver somniferum
QL02p096102 Quercus lobata
RcHm_v2.0_Chr4g0404611 Rosa chinensis
Rhsim01G0009500 Rhododendron simsii
Sabra18G0084300 Salix brachista
SalBow6G2671 Salvia bowleyana
SalBow6G2881 Salvia bowleyana
Sc08g0005370 Simmondsia chinensis
Sc08g0005390 Simmondsia chinensis
Sed0027242 Sechium edule
SEGI_04095 Sequoiadendron giganteum
SEGI_10163 Sequoiadendron giganteum
SGA_v2.0_scaffold66G22503 Striga asiatica
SHI03002 Sapria himalayana
SMO351G0057 Selaginella moellendorffii
Solyc12g014440.2 Solanum lycopersicum
Sopen12g007320 Solanum pennellii
Sp6g19390 Schrenkiella parvula
TAR629G1464 Trochodendron aralioides
THA.LOC104813533 Tarenaya hassleriana
Thecc.09G163500 Theobroma cacao
Thecc.09G163700 Theobroma cacao
Thhalv10013983m.g Eutrema salsugineum
TPR.G40451 Trifolium pratense
TPR.G5299 Trifolium pratense
TPR.G5349 Trifolium pratense
TWI34G0564 Tripterygium wilfordii
TWI34G1734 Tripterygium wilfordii
unitig_0.g567 Utricularia gibba
vmacro13085 Vaccinium macrocarpon
VMungo1215G3242 Vigna mungo
Zm00001eb105910 Zea mays
Zm00001eb105960 Zea mays

User provided reference genes

Program Settings