Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p27280 Brassica napus
Aa31LG7G14930 Aethionema arabicum
Aa31LG7G14960 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2297 Anthoceros agrestis
Actinidia38251 Actinidia chinensis
Ah.16g108220 Amaranthus hybridus
AL4G31930 Arabidopsis lyrata
AL4G31940 Arabidopsis lyrata
Aqoxy4G03197 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.65Y6VJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.9PA5H9 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CT8M8A Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.D7L05R Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZWA97R Arachis hypogaea
AT2G35810 Arabidopsis thaliana
AT2G35820 Arabidopsis thaliana
AT2G35830 Arabidopsis thaliana
ATR1159G086 Amborella trichopoda
Atru.chr12.634 Acer truncatum
AUR62020787 Chenopodium quinoa
AUR62043640 Chenopodium quinoa
BcaB06g28875 Brassica carinata
BcaB06g28877 Brassica carinata
BcaC02g07666 Brassica carinata
BolC4t27957H Brassica oleracea
BraA04t18226Z Brassica rapa
C04p64800 Brassica napus
CAN.G1302.2 Capsicum annuum
CAN.G492.51 Capsicum annuum
CAN.G964.14 Capsicum annuum
CANSAT56G2007 Cannabis sativa
CANSAT56G3849 Cannabis sativa
CARHR130080 Cardamine hirsuta
CARHR130090 Cardamine hirsuta
Carub.0004s1759 Capsella rubella
Ca_10594_v3 Cicer arietinum L.
CBR_g12600 Chara braunii
Cc09_g02730 Coffea canephora
CDE07G1884 Ceratophyllum demersum
Ciclev10032844m.g Citrus clementina
CiPaw.01G276500 Carya illinoinensis
ClCG09G009820 Citrullus lanatus
COL.COLO4_23732 Corchorus olitorius
Cpa.g.sc53.24 Carica papaya
Cre08.g378650 Chlamydomonas reinhardtii
CsaV3_7G024930 Cucumis sativus L.
CSS0026127 Camellia sinensis var. sinensis
DCAR_015276 Daucus carota
DCAR_019135 Daucus carota
Dinv31345 Davidia involucrata
Duzib114G0729 Durio zibethinus
Duzib128G0461 Durio zibethinus
ECA238G0657 Erigeron canadensis
ECA238G3142 Erigeron canadensis
Eucgr.J01124 Eucalyptus grandis
FAN01G3056 Fragaria x ananassa
FAN03G2612 Fragaria x ananassa
FAN06G0525 Fragaria x ananassa
FAN10G3611 Fragaria x ananassa
FvH4_7g20150 Fragaria vesca
Glyma.10G213900 Glycine max
Glyma.10G214000 Glycine max
Gohir.A05G344500 Gossypium hirsutum
Gohir.D04G083000 Gossypium hirsutum
Gorai.012G093700 Gossypium raimondii
GSVIVG01016337001 Vitis vinifera
HanXRQChr07g0200441 Helianthus annuus
Haze_16935 Corylus avellana
Hma1.2p1_0453F.1_g156180 Hydrangea macrophylla
HPP92_007585 Vanilla planifolia
Hund19334 Selenicereus undatus
Lalb_Chr06g0162141 Lupinus albus
Lj5g0013716 Lotus japonicus
Lj8C95T7 Lonicera japonica
Lj8C95T8 Lonicera japonica
Lsat_1_v5_gn_2_115080 Lactuca sativa
Manes.10G042700 Manihot esculenta
Mapoly0113s0026 Marchantia polymorpha
MBI16_g46203_MAGBIO Magnolia biondii
MCO11G764 Micromonas commoda
MD07G1179100 Malus domestica
Medtr1g095890 Medicago truncatula
Medtr1g095900 Medicago truncatula
MELO3C023691.2 Cucumis melo
Migut.F01799 Erythranthe guttata
MSTRG.355 Avicennia marina
Nitab4.5_0000061g0160 Nicotiana tabacum
Nitab4.5_0001721g0020 Nicotiana tabacum
Nitab4.5_0011688g0030 Nicotiana tabacum
Nn2g13000 Nelumbo nucifera
Oeu057235.1 Olea europaea
Os01g0833150 Oryza sativa ssp. japonica
Os01g0833200 Oryza sativa ssp. japonica
Peaxi162Scf00373g00310 Petunia axillaris
PGR044G1235 Punica granatum
Phvul.007G091800 Phaseolus vulgaris
Potri.010G217500 Populus trichocarpa
Pp3c27_2400 Physcomitrium patens
PRCOL_00006731 Prasinoderma coloniale
Prupe.2G218200 Prunus persica
Psat6g186000 Pisum sativum
PSO170G1537 Papaver somniferum
PSO210G2142 Papaver somniferum
PSO210G2334 Papaver somniferum
PSO210G3376 Papaver somniferum
QL08p056831 Quercus lobata
RcHm_v2.0_Chr1g0364101 Rosa chinensis
Rhsim10G0162300 Rhododendron simsii
Sabra10G0168200 Salix brachista
SalBow3G0637 Salvia bowleyana
Sc09g0006770 Simmondsia chinensis
Sc14g0005480 Simmondsia chinensis
Sed0007370 Sechium edule
Sed0009768 Sechium edule
SEGI_21412 Sequoiadendron giganteum
SGA_v2.0_scaffold122G33245 Striga asiatica
SMO147G0059 Selaginella moellendorffii
SMO147G0062 Selaginella moellendorffii
SMO147G0342 Selaginella moellendorffii
SMO257G0002 Selaginella moellendorffii
SMO330G0006 Selaginella moellendorffii
SMO330G0010 Selaginella moellendorffii
SMO330G0030 Selaginella moellendorffii
SMO330G0037 Selaginella moellendorffii
SMO330G0038 Selaginella moellendorffii
SMO330G0050 Selaginella moellendorffii
Solyc10g005830.3 Solanum lycopersicum
Sopen10g001790 Solanum pennellii
Sp4g18090 Schrenkiella parvula
TAR636G2864 Trochodendron aralioides
THA.LOC104803452 Tarenaya hassleriana
Thecc.10G068200 Theobroma cacao
Thecc.10G068300 Theobroma cacao
Thhalv10017274m.g Eutrema salsugineum
TPR.G10956 Trifolium pratense
TPR.G15475 Trifolium pratense
TPR.G38077 Trifolium pratense
TPR.G970 Trifolium pratense
TWI15G1019 Tripterygium wilfordii
TWI38G0703 Tripterygium wilfordii
unitig_0.g188 Utricularia gibba
vmacro17506 Vaccinium macrocarpon
VMungo0720G3076 Vigna mungo
Zm00001eb148920 Zea mays

User provided reference genes

Program Settings