Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
Aa31LG2G10030 Aethionema arabicum
Aa31LG9G5450 Aethionema arabicum
Actinidia07336 Actinidia chinensis
Ah.09g224420 Amaranthus hybridus
AL2G16270 Arabidopsis lyrata
Aqoxy7G00028 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.E2H6AC Arachis hypogaea
AT1G60430 Arabidopsis thaliana
ATR0580G166 Amborella trichopoda
Atru.chr7.1980 Acer truncatum
AUR62011203 Chenopodium quinoa
AUR62013284 Chenopodium quinoa
BcaB07g31213 Brassica carinata
BcaC04g22225 Brassica carinata
CAN.G1382.4 Capsicum annuum
CANSAT11G1632 Cannabis sativa
CARHR052620 Cardamine hirsuta
Carub.0002s0491 Capsella rubella
Ca_21648_v3 Cicer arietinum L.
Cc06_g07800 Coffea canephora
Cc07_g18400 Coffea canephora
CDE04G0420 Ceratophyllum demersum
CDE07G1573 Ceratophyllum demersum
Ciclev10009685m.g Citrus clementina
CiPaw.03G250600 Carya illinoinensis
CiPaw.04G176700 Carya illinoinensis
ClCG11G003410 Citrullus lanatus
COL.COLO4_15552 Corchorus olitorius
Cpa.g.sc277.15 Carica papaya
Cre09.g397950 Chlamydomonas reinhardtii
CsaV3_2G003270 Cucumis sativus L.
CSS0004544 Camellia sinensis var. sinensis
DCAR_009333 Daucus carota
Dinv36460 Davidia involucrata
Dinv41456 Davidia involucrata
Duzib150G0783 Durio zibethinus
Duzib168G1377 Durio zibethinus
Duzib187G1805 Durio zibethinus
ECA236G1442 Erigeron canadensis
EL10Ac8g18779 Beta vulgaris
Eucgr.C04376 Eucalyptus grandis
Eucgr.I02126 Eucalyptus grandis
Eucgr.L01822 Eucalyptus grandis
FAN02G0796 Fragaria x ananassa
FAN11G2421 Fragaria x ananassa
FAN16G0279 Fragaria x ananassa
FAN17G0540 Fragaria x ananassa
FAN17G0595 Fragaria x ananassa
FAN20G0460 Fragaria x ananassa
FAN20G1904 Fragaria x ananassa
FAN21G0596 Fragaria x ananassa
FAN21G3302 Fragaria x ananassa
FAN25G0883 Fragaria x ananassa
FAN28G2985 Fragaria x ananassa
FvH4_3g33280 Fragaria vesca
Glyma.13G162500 Glycine max
Glyma.17G108800 Glycine max
Gohir.A05G013700 Gossypium hirsutum
Gohir.A08G089300 Gossypium hirsutum
Gohir.D05G014800 Gossypium hirsutum
Gohir.D08G100500 Gossypium hirsutum
Gorai.004G108300 Gossypium raimondii
Gorai.009G014900 Gossypium raimondii
GSVIVG01012837001 Vitis vinifera
HanXRQChr06g0180531 Helianthus annuus
Haze_25466 Corylus avellana
Haze_25470 Corylus avellana
Hma1.2p1_0343F.1_g130850 Hydrangea macrophylla
HPP92_021894 Vanilla planifolia
Hund09300 Selenicereus undatus
Lalb_Chr12g0198311 Lupinus albus
Lalb_Chr13g0301391 Lupinus albus
Lj4g0017742 Lotus japonicus
Lj7A437T44 Lonicera japonica
Lsat_1_v5_gn_2_45981 Lactuca sativa
Lsat_1_v5_gn_7_44340 Lactuca sativa
Lsat_1_v5_gn_8_61340 Lactuca sativa
Manes.14G117900 Manihot esculenta
Mapoly0002s0013 Marchantia polymorpha
MBI14_g10734_MAGBIO Magnolia biondii
MD02G1020300 Malus domestica
MD10G1159100 Malus domestica
MD15G1163100 Malus domestica
Medtr0320s0040 Medicago truncatula
Medtr4g115900 Medicago truncatula
MELO3C004473.2 Cucumis melo
Migut.K00410 Erythranthe guttata
MSTRG.26338 Avicennia marina
Nitab4.5_0000704g0070 Nicotiana tabacum
Nitab4.5_0002267g0030 Nicotiana tabacum
Nn8g40617 Nelumbo nucifera
Oeu000523.1 Olea europaea
Os02g0235000 Oryza sativa ssp. japonica
Peaxi162Scf00088g00918 Petunia axillaris
Peaxi162Scf00113g00061 Petunia axillaris
PGR102G2022 Punica granatum
PGSC0003DMG400003270 Solanum tuberosum
PGSC0003DMG400030712 Solanum tuberosum
Phvul.003G171200 Phaseolus vulgaris
Potri.006G063400 Populus trichocarpa
Potri.018G123100 Populus trichocarpa
Pp3c10_12220 Physcomitrium patens
Pp3c3_23320 Physcomitrium patens
Prupe.7G251500 Prunus persica
Psat0s3428g0040 Pisum sativum
PSO675G7544 Papaver somniferum
QL02p090325 Quercus lobata
RcHm_v2.0_Chr5g0060671 Rosa chinensis
Rhsim01G0059600 Rhododendron simsii
Sabra06G0046100 Salix brachista
Sabra18G0104800 Salix brachista
SalBow1G1295 Salvia bowleyana
Sc18g0000220 Simmondsia chinensis
Sed0005481 Sechium edule
Sed0006539 Sechium edule
SEGI_28631 Sequoiadendron giganteum
SGA_v2.0_scaffold37G14721 Striga asiatica
SHI03217 Sapria himalayana
SMO356G0108 Selaginella moellendorffii
Solyc02g014540.3 Solanum lycopersicum
Solyc07g007630.3 Solanum lycopersicum
Sopen02g003910 Solanum pennellii
Sopen07g003620 Solanum pennellii
Sp2g04330 Schrenkiella parvula
TAR625G1190 Trochodendron aralioides
TAR626G0602 Trochodendron aralioides
THA.LOC104815299 Tarenaya hassleriana
Thecc.09G135400 Theobroma cacao
Thhalv10023668m.g Eutrema salsugineum
TPR.G39824 Trifolium pratense
TWI32G1192 Tripterygium wilfordii
TWI38G2392 Tripterygium wilfordii
unitig_748.g7174 Utricularia gibba
vmacro07739 Vaccinium macrocarpon
VMungo0251G3112 Vigna mungo
VMungo1215G1009 Vigna mungo
Zm00001eb150940 Zea mays
Zm00001eb238940 Zea mays
Zm00001eb238960 Zea mays
Zm00001eb238970 Zea mays
Zm00001eb238980 Zea mays
Zm00001eb302220 Zea mays
Zm00001eb438640 Zea mays
Zm00001eb438650 Zea mays

User provided reference genes

Program Settings