Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p01080 Brassica napus
Aa31LG3G15600 Aethionema arabicum
Aa31LG3G15610 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.1866 Anthoceros agrestis
Actinidia30278 Actinidia chinensis
Ah.16g105800 Amaranthus hybridus
AL6G22270 Arabidopsis lyrata
Aqoxy7G03897 Aquilegia oxysepala
Aqoxy7G03898 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.4P6J47 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.805ECA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8C5A90 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MXXD4G Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SBH6GM Arachis hypogaea
AT5G11580 Arabidopsis thaliana
ATR0705G210 Amborella trichopoda
Atru.BG.8.p Acer truncatum
Atru.chr7.2085 Acer truncatum
AUR62009274 Chenopodium quinoa
AUR62039706 Chenopodium quinoa
BcaC03g13376 Brassica carinata
BcaC03g13377 Brassica carinata
BcaNung01936 Brassica carinata
BolC2t06473H Brassica oleracea
BolC2t06474H Brassica oleracea
BraA02t05088Z Brassica rapa
C02p05220 Brassica napus
CAN.G400.12 Capsicum annuum
CAN.G400.13 Capsicum annuum
CANSAT35G1732 Cannabis sativa
CARHR201640 Cardamine hirsuta
Carub.0006s1005 Capsella rubella
Carub.0006s1006 Capsella rubella
Ca_12755_v3 Cicer arietinum L.
Ca_15589_v3 Cicer arietinum L.
CBR_g29831 Chara braunii
Cc08_g09650 Coffea canephora
Cfa013368 Carpinus fangiana
Ciclev10008071m.g Citrus clementina
CiPaw.07G203900 Carya illinoinensis
ClCG08G012200 Citrullus lanatus
COL.COLO4_20973 Corchorus olitorius
Cpa.g.sc78.3 Carica papaya
CsaV3_2G030830 Cucumis sativus L.
CSS0000397 Camellia sinensis var. sinensis
CSS0025156 Camellia sinensis var. sinensis
CSS0036341 Camellia sinensis var. sinensis
CSS0038056 Camellia sinensis var. sinensis
DCAR_003122 Daucus carota
Dinv23373 Davidia involucrata
Dinv27906 Davidia involucrata
Duzib168G1333 Durio zibethinus
ECA233G5498 Erigeron canadensis
ECA246G0608 Erigeron canadensis
EL10Ac2g04015 Beta vulgaris
Eucgr.C00552 Eucalyptus grandis
Eucgr.C00598 Eucalyptus grandis
FAN05G4865 Fragaria x ananassa
FAN20G2629 Fragaria x ananassa
FAN27G0538 Fragaria x ananassa
FvH4_2g35481 Fragaria vesca
FvH4_2g35490 Fragaria vesca
Glyma.04G084400 Glycine max
Glyma.14G145900 Glycine max
Gohir.A07G022400 Gossypium hirsutum
Gohir.D07G025800 Gossypium hirsutum
Gorai.001G026900 Gossypium raimondii
GSVIVG01035619001 Vitis vinifera
GSVIVG01035620001 Vitis vinifera
HanXRQChr02g0058291 Helianthus annuus
HanXRQChr08g0234411 Helianthus annuus
HanXRQChr13g0402051 Helianthus annuus
Haze_21891 Corylus avellana
Hma1.2p1_0049F.1_g028560 Hydrangea macrophylla
HPP92_005574 Vanilla planifolia
Hund19511 Selenicereus undatus
Lalb_Chr23g0269641 Lupinus albus
Lalb_Chr23g0269651 Lupinus albus
Lj1g0023868 Lotus japonicus
Lj7C700G7 Lonicera japonica
Lsat_1_v5_gn_5_33641 Lactuca sativa
Lsat_1_v5_gn_6_22621 Lactuca sativa
Manes.03G058900 Manihot esculenta
MBI04_g40323_MAGBIO Magnolia biondii
MBI04_g45218_MAGBIO Magnolia biondii
MD15G1092900 Malus domestica
MD15G1093100 Malus domestica
Medtr1g006695 Medicago truncatula
Medtr3g109650 Medicago truncatula
MELO3C011138.2 Cucumis melo
Migut.A00200 Erythranthe guttata
MSTRG.25910 Avicennia marina
MSTRG.9075 Avicennia marina
Nitab4.5_0001515g0020 Nicotiana tabacum
Nitab4.5_0003794g0030 Nicotiana tabacum
Nn8g39123 Nelumbo nucifera
Oeu043884.1 Olea europaea
Os01g0725600 Oryza sativa ssp. japonica
Peaxi162Scf00227g00811 Petunia axillaris
PGR031G2838 Punica granatum
PGSC0003DMG400002226 Solanum tuberosum
Phvul.001G074200 Phaseolus vulgaris
Phvul.009G110000 Phaseolus vulgaris
Potri.018G044400 Populus trichocarpa
Pp3c19_13410 Physcomitrium patens
Pp3c1_16260 Physcomitrium patens
Pp3c21_18100 Physcomitrium patens
Pp3c22_14560 Physcomitrium patens
Pp3c2_21710 Physcomitrium patens
Pp3c7_12470 Physcomitrium patens
Prupe.1G447800 Prunus persica
Prupe.1G447900 Prunus persica
Psat5g021200 Pisum sativum
PSO210G1892 Papaver somniferum
QL05p071834 Quercus lobata
RcHm_v2.0_Chr6g0306311 Rosa chinensis
RcHm_v2.0_Chr6g0306321 Rosa chinensis
RcHm_v2.0_Chr6g0306371 Rosa chinensis
RcHm_v2.0_Chr6g0306381 Rosa chinensis
Rhsim02G0177000 Rhododendron simsii
Sabra18G0044300 Salix brachista
SalBow4G2901 Salvia bowleyana
Sc24g0002330 Simmondsia chinensis
Sed0010019 Sechium edule
SEGI_28740 Sequoiadendron giganteum
SGA_v2.0_scaffold103G30008 Striga asiatica
SGA_v2.0_scaffold103G30010 Striga asiatica
Solyc08g066570.3 Solanum lycopersicum
Sopen08g020400 Solanum pennellii
Sopen08g020410 Solanum pennellii
Sp6g32030 Schrenkiella parvula
TAR624G0235 Trochodendron aralioides
TAR624G0675 Trochodendron aralioides
Thecc.09G045600 Theobroma cacao
Thhalv10013150m.g Eutrema salsugineum
TPR.G15096 Trifolium pratense
TPR.G15100 Trifolium pratense
TPR.G24514 Trifolium pratense
TPR.G24537 Trifolium pratense
TWI63G1465 Tripterygium wilfordii
vmacro11057 Vaccinium macrocarpon
VMungo1117G0001 Vigna mungo
VMungo1309G2609 Vigna mungo
Zm00001eb154440 Zea mays

User provided reference genes

Program Settings