Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p28930 Brassica napus
Aa31LG9G12010 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.2345 Anthoceros agrestis
Actinidia06757 Actinidia chinensis
Actinidia06758 Actinidia chinensis
Actinidia06759 Actinidia chinensis
Actinidia22445 Actinidia chinensis
Ah.07g201890 Amaranthus hybridus
AL6G43680 Arabidopsis lyrata
Aqoxy7G00280 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.7ZJB2L Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IW4QJC Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JBBQ4L Arachis hypogaea
AT4G09980 Arabidopsis thaliana
ATR0618G373 Amborella trichopoda
Atru.chr1.399 Acer truncatum
AUR62021146 Chenopodium quinoa
AUR62031391 Chenopodium quinoa
BcaB01g01438 Brassica carinata
BcaC04g21005 Brassica carinata
BolC9t56504H Brassica oleracea
BraA09t38457Z Brassica rapa
C09p36730 Brassica napus
CAN.G694.94 Capsicum annuum
CAN.G694.95 Capsicum annuum
CARHR260960 Cardamine hirsuta
Carub.0006s2852 Capsella rubella
Ca_10736_v3 Cicer arietinum L.
CBR_g46618 Chara braunii
CBR_g46623 Chara braunii
Cc02_g11150 Coffea canephora
CDE05G2228 Ceratophyllum demersum
CDE05G3165 Ceratophyllum demersum
CDE11G0704 Ceratophyllum demersum
Cfa016269 Carpinus fangiana
Ciclev10004180m.g Citrus clementina
CiPaw.05G164300 Carya illinoinensis
ClCG07G016960 Citrullus lanatus
Cpa.g.sc42.153 Carica papaya
Cpa.g.sc42.154 Carica papaya
Cre01.g050600 Chlamydomonas reinhardtii
CsaV3_4G004180 Cucumis sativus L.
CSS0011841 Camellia sinensis var. sinensis
CSS0039069 Camellia sinensis var. sinensis
CSS0049575 Camellia sinensis var. sinensis
DCAR_006428 Daucus carota
Dinv13548 Davidia involucrata
Dinv28407 Davidia involucrata
Duzib170G0925 Durio zibethinus
ECA233G2984 Erigeron canadensis
EL10Ac3g05588 Beta vulgaris
Eucgr.C03422 Eucalyptus grandis
FAN19G1688 Fragaria x ananassa
FAN23G0292 Fragaria x ananassa
FAN26G0882 Fragaria x ananassa
FAN28G2294 Fragaria x ananassa
FvH4_1g22240 Fragaria vesca
Glyma.10G232300 Glycine max
Glyma.20G161800 Glycine max
Gohir.A07G074600 Gossypium hirsutum
Gohir.D07G079300 Gossypium hirsutum
Gorai.001G083900 Gossypium raimondii
GSVIVG01028893001 Vitis vinifera
HanXRQChr08g0218691 Helianthus annuus
HanXRQChr12g0368711 Helianthus annuus
Haze_00026 Corylus avellana
Hma1.2p1_2038F.1_g312080 Hydrangea macrophylla
HPP92_018497 Vanilla planifolia
HPP92_018498 Vanilla planifolia
Hund04775 Selenicereus undatus
Hund11728 Selenicereus undatus
Lalb_Chr02g0141181 Lupinus albus
Lalb_Chr21g0305161 Lupinus albus
Lalb_Chr21g0305171 Lupinus albus
Lj5g0027810 Lotus japonicus
Lj8A722G14 Lonicera japonica
Lsat_1_v5_gn_8_20461 Lactuca sativa
Manes.14G024000 Manihot esculenta
Mapoly0005s0162 Marchantia polymorpha
MD07G1276200 Malus domestica
Medtr1g100210 Medicago truncatula
MELO3C017648.2 Cucumis melo
Migut.F01728 Erythranthe guttata
MSTRG.380 Avicennia marina
MSTRG.8138 Avicennia marina
Nitab4.5_0000582g0120 Nicotiana tabacum
Nitab4.5_0007148g0020 Nicotiana tabacum
Nitab4.5_0009827g0020 Nicotiana tabacum
Nitab4.5_0013274g0010 Nicotiana tabacum
Nn1g01560 Nelumbo nucifera
Nn4g25469 Nelumbo nucifera
Nn8g41261 Nelumbo nucifera
Oeu014380.1 Olea europaea
Oeu041197.1 Olea europaea
Os01g0267100 Oryza sativa ssp. japonica
Os03g0147700 Oryza sativa ssp. japonica
Os10g0447600 Oryza sativa ssp. japonica
Peaxi162Scf00858g00214 Petunia axillaris
PGR102G0407 Punica granatum
PGSC0003DMG401023336 Solanum tuberosum
PGSC0003DMG402023336 Solanum tuberosum
Phvul.007G073300 Phaseolus vulgaris
Potri.012G144400 Populus trichocarpa
Potri.015G147200 Populus trichocarpa
Pp3c5_5900 Physcomitrium patens
Pp3c6_26980 Physcomitrium patens
Prupe.2G298500 Prunus persica
Psat6g193720 Pisum sativum
PSO170G2956 Papaver somniferum
PSO528G0151 Papaver somniferum
QL09p013403 Quercus lobata
RcHm_v2.0_Chr2g0116381 Rosa chinensis
Rhsim03G0189000 Rhododendron simsii
Rhsim09G0150800 Rhododendron simsii
RhsimUnG0027300 Rhododendron simsii
Sabra12G0108400 Salix brachista
Sabra15G0156100 Salix brachista
SalBow7G4258 Salvia bowleyana
Sc20g0006810 Simmondsia chinensis
Sed0005714 Sechium edule
SEGI_16406 Sequoiadendron giganteum
SEGI_26780 Sequoiadendron giganteum
SEGI_30084 Sequoiadendron giganteum
SGA_v2.0_scaffold51G18697 Striga asiatica
Solyc05g056210.4 Solanum lycopersicum
Solyc05g056220.3 Solanum lycopersicum
Sopen05g034600 Solanum pennellii
Sopen05g034610 Solanum pennellii
Sp6g07330 Schrenkiella parvula
TAR375G0877 Trochodendron aralioides
TAR629G2045 Trochodendron aralioides
THA.LOC104811969 Tarenaya hassleriana
Thecc.08G165200 Theobroma cacao
Thhalv10028402m.g Eutrema salsugineum
TPR.G22241 Trifolium pratense
TPR.G26976 Trifolium pratense
TWI14G0968 Tripterygium wilfordii
TWI39G1086 Tripterygium wilfordii
unitig_736.g22332 Utricularia gibba
unitig_736.g22333 Utricularia gibba
vmacro04863 Vaccinium macrocarpon
vmacro22314 Vaccinium macrocarpon
VMungo0720G1404 Vigna mungo
Zm00001eb003840 Zea mays

User provided reference genes

Program Settings