Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p05570 Brassica napus
A10p20220 Brassica napus
Aa31LG1G8850 Aethionema arabicum
Actinidia06848 Actinidia chinensis
Actinidia16258 Actinidia chinensis
Ah.06g194900 Amaranthus hybridus
AL6G30990 Arabidopsis lyrata
Aqoxy1G00076 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.554KFZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YWPQ0A Arachis hypogaea
AT5G19485 Arabidopsis thaliana
ATR0307G025 Amborella trichopoda
Atru.chr3.2845 Acer truncatum
AUR62000229 Chenopodium quinoa
AUR62006575 Chenopodium quinoa
BcaC04g24210 Brassica carinata
BNapus_Darmor_BZH_scaffold_38p02380 Brassica napus
BolC2t06957H Brassica oleracea
BolC9t58535H Brassica oleracea
BraA02t05508Z Brassica rapa
BraA10t44093Z Brassica rapa
C09p56810 Brassica napus
CAN.G280.6 Capsicum annuum
CANSAT54G1170 Cannabis sativa
CARHR193430 Cardamine hirsuta
Carub.0006s1783 Capsella rubella
Ca_17953_v3 Cicer arietinum L.
CBR_g54067 Chara braunii
Cc01_g07300 Coffea canephora
CDE08G0498 Ceratophyllum demersum
Cfa009930 Carpinus fangiana
Ciclev10015197m.g Citrus clementina
CiPaw.13G147000 Carya illinoinensis
ClCG03G014290 Citrullus lanatus
COL.COLO4_33253 Corchorus olitorius
Cpa.g.sc34.203 Carica papaya
Cre03.g207825 Chlamydomonas reinhardtii
CsaV3_1G041930 Cucumis sativus L.
CSS0009799 Camellia sinensis var. sinensis
CSS0018745 Camellia sinensis var. sinensis
CSS0035138 Camellia sinensis var. sinensis
DCAR_031608 Daucus carota
Dinv24610 Davidia involucrata
Dinv24611 Davidia involucrata
Dinv29329 Davidia involucrata
Duzib150G0729 Durio zibethinus
Duzib150G1312 Durio zibethinus
Duzib168G0825 Durio zibethinus
ECA238G4724 Erigeron canadensis
EL10Ac4g10073 Beta vulgaris
Eucgr.B03758 Eucalyptus grandis
FAN19G0408 Fragaria x ananassa
FAN23G0348 Fragaria x ananassa
FAN26G2809 Fragaria x ananassa
FAN28G1729 Fragaria x ananassa
FvH4_1g25390 Fragaria vesca
FvH4_4g06340 Fragaria vesca
Glyma.05G155700 Glycine max
Glyma.08G113500 Glycine max
Gohir.A05G264150 Gossypium hirsutum
Gohir.A08G009200 Gossypium hirsutum
Gohir.A09G109300 Gossypium hirsutum
Gohir.D08G019200 Gossypium hirsutum
Gohir.D09G105900 Gossypium hirsutum
Gorai.004G013700 Gossypium raimondii
Gorai.006G123300 Gossypium raimondii
GSVIVG01002283001 Vitis vinifera
GSVIVG01020254001 Vitis vinifera
HanXRQChr13g0402151 Helianthus annuus
Haze_23295 Corylus avellana
Haze_23300 Corylus avellana
HPP92_016891 Vanilla planifolia
Hund07409 Selenicereus undatus
Lalb_Chr07g0186541 Lupinus albus
Lj2C810G6 Lonicera japonica
Lj4g0004497 Lotus japonicus
Lsat_1_v5_gn_2_32160 Lactuca sativa
Manes.01G177100 Manihot esculenta
Manes.05G199900 Manihot esculenta
Mapoly0050s0011 Marchantia polymorpha
Mapoly0050s0012 Marchantia polymorpha
Mapoly0070s0045 Marchantia polymorpha
Mapoly0070s0046 Marchantia polymorpha
MBI13_g00890_MAGBIO Magnolia biondii
MCO03G336 Micromonas commoda
MD03G1163000 Malus domestica
Medtr8g085640 Medicago truncatula
MELO3C015608.2 Cucumis melo
MELO3C033360.2 Cucumis melo
Migut.D00707 Erythranthe guttata
MSTRG.21320 Avicennia marina
Nitab4.5_0002161g0080 Nicotiana tabacum
Nitab4.5_0002567g0160 Nicotiana tabacum
Nn7g36957 Nelumbo nucifera
Nn7g36961 Nelumbo nucifera
Oeu025950.1 Olea europaea
Oeu032061.2 Olea europaea
Os06g0338900 Oryza sativa ssp. japonica
Peaxi162Scf00978g00317 Petunia axillaris
PGR102G1412 Punica granatum
PGSC0003DMG400027416 Solanum tuberosum
Phvul.002G235800 Phaseolus vulgaris
Potri.001G271800 Populus trichocarpa
Potri.009G066400 Populus trichocarpa
Pp3c16_600 Physcomitrium patens
PRCOL_00006600 Prasinoderma coloniale
Prupe.4G269500 Prunus persica
Psat0s3158g0040 Pisum sativum
Psat0s472g0120 Pisum sativum
Psat1g145560 Pisum sativum
Psat2g003760 Pisum sativum
Psat2g028360 Pisum sativum
Psat7g073480 Pisum sativum
PSO339G0973 Papaver somniferum
PSO384G0943 Papaver somniferum
QL01p016185 Quercus lobata
RcHm_v2.0_Chr2g0123421 Rosa chinensis
Rhsim13G0231000 Rhododendron simsii
Sabra09G0049500 Salix brachista
Sabra16G0167000 Salix brachista
SalBow6G0054 Salvia bowleyana
Sc16g0010870 Simmondsia chinensis
Sed0001059 Sechium edule
Sed0024170 Sechium edule
SEGI_36393 Sequoiadendron giganteum
SGA_v2.0_scaffold29G12151 Striga asiatica
SMO117G0151 Selaginella moellendorffii
Solyc11g072090.2 Solanum lycopersicum
Sopen11g029740 Solanum pennellii
Sp6g24920 Schrenkiella parvula
TAR623G0477 Trochodendron aralioides
TAR628G1140 Trochodendron aralioides
THA.LOC104811208 Tarenaya hassleriana
Thecc.09G252100 Theobroma cacao
Thhalv10013503m.g Eutrema salsugineum
TPR.G24369 Trifolium pratense
TWI31G0483 Tripterygium wilfordii
TWI75G0256 Tripterygium wilfordii
unitig_0.g309 Utricularia gibba
vmacro04223 Vaccinium macrocarpon
VMungo0251G0349 Vigna mungo
VMungo0251G1518 Vigna mungo
VMungo0720G0475 Vigna mungo
Zm00001eb051600 Zea mays

User provided reference genes

Program Settings