Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p44560 Brassica napus
Aa31LG5G10540 Aethionema arabicum
Actinidia10703 Actinidia chinensis
Ah.04g165510 Amaranthus hybridus
AL3G10726 Arabidopsis lyrata
AL3G10730 Arabidopsis lyrata
Aqoxy3G04228 Aquilegia oxysepala
Aqoxy4G02127 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.IUT8LB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TVDX40 Arachis hypogaea
AT3G01440 Arabidopsis thaliana
ATR0618G414 Amborella trichopoda
ATR1088G002 Amborella trichopoda
Atru.chr2.3182 Acer truncatum
AUR62015635 Chenopodium quinoa
AUR62029237 Chenopodium quinoa
BcaC09g47660 Brassica carinata
BcaC09g47661 Brassica carinata
BNapus_Darmor_BZH_scaffold_119p00040 Brassica napus
BNapus_Darmor_BZH_scaffold_133p00030 Brassica napus
BNapus_Darmor_BZH_scaffold_97p00390 Brassica napus
BolC1t05957H Brassica oleracea
BolC5t35149H Brassica oleracea
BraA01t04665Z Brassica rapa
BraA05t23200Z Brassica rapa
C09p75150 Brassica napus
CAN.G1110.14 Capsicum annuum
CANSAT11G2246 Cannabis sativa
CANSAT78G1166 Cannabis sativa
CARHR075520 Cardamine hirsuta
Carub.0003s0066 Capsella rubella
Cc05_g13170 Coffea canephora
CDE02G2038 Ceratophyllum demersum
CDE05G0607 Ceratophyllum demersum
Cfa020435 Carpinus fangiana
Ciclev10009429m.g Citrus clementina
CiPaw.11G183000 Carya illinoinensis
ClCG05G014820 Citrullus lanatus
COL.COLO4_09556 Corchorus olitorius
Cpa.g.sc97.80 Carica papaya
CsaV3_3G022840 Cucumis sativus L.
DCAR_002620 Daucus carota
DCAR_030341 Daucus carota
Dinv02962 Davidia involucrata
Dinv03942 Davidia involucrata
Duzib213G0859 Durio zibethinus
Duzib268G0515 Durio zibethinus
ECA246G3532 Erigeron canadensis
EL10Ac4g07988 Beta vulgaris
Eucgr.F00997 Eucalyptus grandis
FAN07G0272 Fragaria x ananassa
FAN11G1458 Fragaria x ananassa
FAN12G2448 Fragaria x ananassa
FAN16G0805 Fragaria x ananassa
FAN17G0758 Fragaria x ananassa
FAN21G0024 Fragaria x ananassa
FAN22G0888 Fragaria x ananassa
FAN25G2907 Fragaria x ananassa
FvH4_3g21690 Fragaria vesca
FvH4_4g36490 Fragaria vesca
Glyma.12G215100 Glycine max
Glyma.13G286500 Glycine max
Gohir.A13G141700 Gossypium hirsutum
Gohir.D13G146400 Gossypium hirsutum
Gorai.013G164200 Gossypium raimondii
GSVIVG01014586001 Vitis vinifera
HanXRQChr05g0159241 Helianthus annuus
Haze_09593 Corylus avellana
Hma1.2p1_1054F.1_g252460 Hydrangea macrophylla
HPP92_014780 Vanilla planifolia
Lalb_Chr22g0357101 Lupinus albus
Lj3g0021556 Lotus japonicus
Lj8A165T109 Lonicera japonica
Lsat_1_v5_gn_5_4581 Lactuca sativa
Manes.15G077300 Manihot esculenta
MBI02_g29711_MAGBIO Magnolia biondii
MBI03_g05132_MAGBIO Magnolia biondii
MBI03_g22258_MAGBIO Magnolia biondii
MD03G1212800 Malus domestica
MD11G1227900 Malus domestica
MD13G1008800 Malus domestica
MD16G1006800 Malus domestica
Medtr2g082580 Medicago truncatula
MELO3C018131.2 Cucumis melo
Migut.M01815 Erythranthe guttata
MSTRG.6887 Avicennia marina
Nitab4.5_0002229g0110 Nicotiana tabacum
Nitab4.5_0002342g0120 Nicotiana tabacum
Nn1g03713 Nelumbo nucifera
Nn3g18682 Nelumbo nucifera
Oeu007617.1 Olea europaea
Oeu013859.1 Olea europaea
Os04g0522800 Oryza sativa ssp. japonica
Os07g0105600 Oryza sativa ssp. japonica
Peaxi162Scf00257g00046 Petunia axillaris
PGR083G1335 Punica granatum
PGSC0003DMG400014402 Solanum tuberosum
Phvul.005G090800 Phaseolus vulgaris
Potri.001G416400 Populus trichocarpa
Prupe.1G343900 Prunus persica
Prupe.4G201300 Prunus persica
Psat5g249520 Pisum sativum
PSO063G4433 Papaver somniferum
PSO063G6809 Papaver somniferum
PSO198G0099 Papaver somniferum
PSO541G0032 Papaver somniferum
PSO675G5450 Papaver somniferum
PSO782G4591 Papaver somniferum
QL03p042997 Quercus lobata
QL08p013481 Quercus lobata
QL08p013801 Quercus lobata
RcHm_v2.0_Chr4g0446251 Rosa chinensis
RcHm_v2.0_Chr5g0037191 Rosa chinensis
Rhsim09G0077600 Rhododendron simsii
RhsimUnG0253500 Rhododendron simsii
Sabra11G0119000 Salix brachista
Sabra16G0283100 Salix brachista
SalBow1G6381 Salvia bowleyana
SalBow8G1056 Salvia bowleyana
Sed0028080 Sechium edule
Solyc10g006530.4 Solanum lycopersicum
Sopen10g002480 Solanum pennellii
Sp3g00620 Schrenkiella parvula
TAR374G0035 Trochodendron aralioides
TAR374G1162 Trochodendron aralioides
TAR622G0859 Trochodendron aralioides
TAR629G3517 Trochodendron aralioides
THA.LOC104821064 Tarenaya hassleriana
Thecc.07G055100 Theobroma cacao
Thhalv10021484m.g Eutrema salsugineum
Thhalv10022842m.g Eutrema salsugineum
TPR.G18425 Trifolium pratense
TWI38G1768 Tripterygium wilfordii
TWI53G0022 Tripterygium wilfordii
TWI74G0351 Tripterygium wilfordii
unitig_37.g12586 Utricularia gibba
vmacro09750 Vaccinium macrocarpon
vmacro10768 Vaccinium macrocarpon
vmacro22723 Vaccinium macrocarpon
VMungo1080G1490 Vigna mungo
Zm00001eb077060 Zea mays
Zm00001eb247850 Zea mays
Zm00001eb298270 Zea mays
Zm00001eb426760 Zea mays

User provided reference genes

Program Settings