Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p08210 Brassica napus
A08p33360 Brassica napus
A09p64400 Brassica napus
Aa31LG1G3110 Aethionema arabicum
Aa31LG6G3890 Aethionema arabicum
AL1G22790 Arabidopsis lyrata
Aqoxy1G03603 Aquilegia oxysepala
Aqoxy4G01362 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0GES1T Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.1P1WAU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.6X23CA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.89FC4C Arachis hypogaea
AT1G11655 Arabidopsis thaliana
ATR0752G088 Amborella trichopoda
Atru.chr10.2207 Acer truncatum
BcaB03g13244 Brassica carinata
BcaB08g37410 Brassica carinata
BcaC05g25032 Brassica carinata
BcaC07g38677 Brassica carinata
BcaC07g41768 Brassica carinata
BcaNung04807 Brassica carinata
BolC5t29718H Brassica oleracea
BolC8t49112H Brassica oleracea
BolC8t52343H Brassica oleracea
BraA06t24021Z Brassica rapa
BraA08t35253Z Brassica rapa
BraA09t41784Z Brassica rapa
C05p09770 Brassica napus
C08p14770 Brassica napus
C08p48100 Brassica napus
CAN.G569.14 Capsicum annuum
CANSAT56G2875 Cannabis sativa
CARHR011960 Cardamine hirsuta
Carub.0001s1129 Capsella rubella
Cc09_g01800 Coffea canephora
Cfa000235 Carpinus fangiana
Cfa017341 Carpinus fangiana
Cfa021903 Carpinus fangiana
Ciclev10017536m.g Citrus clementina
CiPaw.09G090600 Carya illinoinensis
CiPaw.10G070100 Carya illinoinensis
ClCG01G022050 Citrullus lanatus
ClCG03G004790 Citrullus lanatus
COL.COLO4_31758 Corchorus olitorius
CsaV3_1G010830 Cucumis sativus L.
CsaV3_6G049110 Cucumis sativus L.
DCAR_004212 Daucus carota
DCAR_008143 Daucus carota
Dinv20040 Davidia involucrata
Duzib160G0401 Durio zibethinus
Duzib192G0836 Durio zibethinus
Duzib235G0113 Durio zibethinus
ECA234G1355 Erigeron canadensis
EL10Ac8g20036 Beta vulgaris
Eucgr.D01311 Eucalyptus grandis
Eucgr.D01314 Eucalyptus grandis
Eucgr.E04071 Eucalyptus grandis
Eucgr.E04072 Eucalyptus grandis
Eucgr.E04074 Eucalyptus grandis
Eucgr.L02166 Eucalyptus grandis
FAN25G2807 Fragaria x ananassa
FvH4_3g02270 Fragaria vesca
Glyma.13G205400 Glycine max
Glyma.15G107000 Glycine max
Glyma.18G063800 Glycine max
Gohir.A05G169600 Gossypium hirsutum
Gohir.A06G148050 Gossypium hirsutum
Gohir.A10G013400 Gossypium hirsutum
Gohir.D05G172800 Gossypium hirsutum
Gohir.D06G153975 Gossypium hirsutum
Gohir.D10G013300 Gossypium hirsutum
Gorai.009G178000 Gossypium raimondii
Gorai.010G180000 Gossypium raimondii
Gorai.011G015000 Gossypium raimondii
HanXRQChr16g0515991 Helianthus annuus
Haze_06787 Corylus avellana
Haze_09878 Corylus avellana
Hma1.2p1_1142F.1_g260990 Hydrangea macrophylla
Lalb_Chr15g0087551 Lupinus albus
Lalb_Chr18g0056301 Lupinus albus
Lj6g0027274 Lotus japonicus
Lsat_1_v5_gn_4_59601 Lactuca sativa
Manes.16G008100 Manihot esculenta
MBI18_g02740_MAGBIO Magnolia biondii
MD00G1206700 Malus domestica
MD05G1344200 Malus domestica
MD10G1320200 Malus domestica
Medtr2g022960 Medicago truncatula
Medtr3g463740 Medicago truncatula
MELO3C002462.2 Cucumis melo
MELO3C007384.2 Cucumis melo
Migut.M01309 Erythranthe guttata
MSTRG.13145 Avicennia marina
Nitab4.5_0000005g0440 Nicotiana tabacum
Nitab4.5_0000389g0060 Nicotiana tabacum
Nitab4.5_0000389g0090 Nicotiana tabacum
Nitab4.5_0003254g0050 Nicotiana tabacum
Nitab4.5_0006137g0040 Nicotiana tabacum
Nn1g03549 Nelumbo nucifera
Nn5g29365 Nelumbo nucifera
Oeu033894.1 Olea europaea
Oeu051213.1 Olea europaea
Peaxi162Scf00262g00094 Petunia axillaris
Peaxi162Scf00565g00021 Petunia axillaris
Peaxi162Scf00565g00036 Petunia axillaris
PGR004G1778 Punica granatum
PGR042G2779 Punica granatum
PGSC0003DMG400004522 Solanum tuberosum
PGSC0003DMG400016491 Solanum tuberosum
Phvul.006G150300 Phaseolus vulgaris
Potri.004G016800 Populus trichocarpa
Potri.011G002100 Populus trichocarpa
Prupe.4G022200 Prunus persica
PSO210G5560 Papaver somniferum
PSO832G1518 Papaver somniferum
QL05p073519 Quercus lobata
QL05p073756 Quercus lobata
RcHm_v2.0_Chr5g0003391 Rosa chinensis
Rhsim02G0108200 Rhododendron simsii
Rhsim02G0108700 Rhododendron simsii
Rhsim02G0109000 Rhododendron simsii
Rhsim02G0109500 Rhododendron simsii
Sabra04G0009100 Salix brachista
SalBow8G4932 Salvia bowleyana
Sed0005209 Sechium edule
Sed0011520 Sechium edule
Sed0027353 Sechium edule
SGA_v2.0_scaffold4G01918 Striga asiatica
SGA_v2.0_scaffold89G27461 Striga asiatica
Solyc02g080450.1 Solanum lycopersicum
Sopen02g025140 Solanum pennellii
TAR624G0719 Trochodendron aralioides
TAR627G0695 Trochodendron aralioides
THA.LOC104806304 Tarenaya hassleriana
THA.LOC104818840 Tarenaya hassleriana
Thecc.06G087600 Theobroma cacao
Thecc.06G219100 Theobroma cacao
Thhalv10009573m.g Eutrema salsugineum
TPR.G21187 Trifolium pratense
TPR.G7637 Trifolium pratense
TWI38G0534 Tripterygium wilfordii
unitig_26.g9388 Utricularia gibba
unitig_749.g13630 Utricularia gibba
VMungo0540G0286 Vigna mungo

User provided reference genes

Program Settings