Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p08120 Brassica napus
Aa31LG2G20560 Aethionema arabicum
Aa31sc367G20 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.716 Anthoceros agrestis
Actinidia00572 Actinidia chinensis
Actinidia16153 Actinidia chinensis
Ah.03g138790 Amaranthus hybridus
AL2G28280 Arabidopsis lyrata
AL7G22240 Arabidopsis lyrata
Aqoxy6G03037 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1IY8V2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.BAL663 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.BYWX90 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.W47LMS Arachis hypogaea
AT1G69190 Arabidopsis thaliana
AT4G30000 Arabidopsis thaliana
ATR0827G107 Amborella trichopoda
Atru.chr11.1603 Acer truncatum
AUR62003082 Chenopodium quinoa
AUR62007898 Chenopodium quinoa
AUR62007899 Chenopodium quinoa
BcaC09g51778 Brassica carinata
BolC1t00900H Brassica oleracea
BraA01t00759Z Brassica rapa
C01p09090 Brassica napus
CAN.G707.21 Capsicum annuum
CANSAT80G1664 Cannabis sativa
CARHR062340 Cardamine hirsuta
CARHR237920 Cardamine hirsuta
Carub.0007s1065 Capsella rubella
Ca_05000_v3 Cicer arietinum L.
CBR_g61480 Chara braunii
Cc11_g11810 Coffea canephora
CDE04G0587 Ceratophyllum demersum
Cfa008863 Carpinus fangiana
Cfa024768 Carpinus fangiana
Ciclev10031260m.g Citrus clementina
CiPaw.06G093200 Carya illinoinensis
ClCG11G000950 Citrullus lanatus
COL.COLO4_27858 Corchorus olitorius
Cpa.g.sc1.153 Carica papaya
Cre10.g428550 Chlamydomonas reinhardtii
CsaV3_5G008630 Cucumis sativus L.
CSS0003869 Camellia sinensis var. sinensis
CSS0031076 Camellia sinensis var. sinensis
DCAR_004043 Daucus carota
Dinv34052 Davidia involucrata
Duzib251G0330 Durio zibethinus
ECA246G3793 Erigeron canadensis
EL10Ac6g15018 Beta vulgaris
Eucgr.F03034 Eucalyptus grandis
FAN07G1983 Fragaria x ananassa
FAN12G0824 Fragaria x ananassa
FAN12G2267 Fragaria x ananassa
FAN17G1346 Fragaria x ananassa
FvH4_4g10620 Fragaria vesca
Glyma.01G062200 Glycine max
Glyma.02G120400 Glycine max
Gohir.A12G160100 Gossypium hirsutum
Gohir.D12G163500 Gossypium hirsutum
Gorai.008G176100 Gossypium raimondii
GSVIVG01012238001 Vitis vinifera
HanXRQChr03g0092011 Helianthus annuus
HanXRQChr04g0120931 Helianthus annuus
HanXRQChr04g0120941 Helianthus annuus
HanXRQChr12g0375111 Helianthus annuus
HanXRQChr15g0477151 Helianthus annuus
Haze_11886 Corylus avellana
Hma1.2p1_0051F.1_g029440 Hydrangea macrophylla
HPP92_017786 Vanilla planifolia
Hund25165 Selenicereus undatus
Lalb_Chr04g0255551 Lupinus albus
Lalb_Chr10g0098931 Lupinus albus
Lj2g0003273 Lotus japonicus
Lj3P1029T28 Lonicera japonica
LjContig00272g0016968 Lotus japonicus
Lsat_1_v5_gn_3_53701 Lactuca sativa
Manes.10G001000 Manihot esculenta
Mapoly0021s0079 Marchantia polymorpha
MBI16_g03095_MAGBIO Magnolia biondii
MCO11G893 Micromonas commoda
MD06G1024100 Malus domestica
MD16G1281400 Malus domestica
Medtr0076s0050 Medicago truncatula
Medtr5g044980 Medicago truncatula
MELO3C020077.2 Cucumis melo
Migut.L01174 Erythranthe guttata
MSTRG.7736 Avicennia marina
Nitab4.5_0000231g0060 Nicotiana tabacum
Nitab4.5_0007734g0040 Nicotiana tabacum
Nn2g15478 Nelumbo nucifera
Nn4g23480 Nelumbo nucifera
Nn4g23481 Nelumbo nucifera
Nn8g41224 Nelumbo nucifera
Oeu055095.2 Olea europaea
Os07g0618500 Oryza sativa ssp. japonica
Peaxi162Scf00175g00052 Petunia axillaris
PGR102G0586 Punica granatum
PGSC0003DMG400028362 Solanum tuberosum
Phvul.001G131450 Phaseolus vulgaris
Phvul.007G262101 Phaseolus vulgaris
Potri.008G097400 Populus trichocarpa
Pp3c27_4310 Physcomitrium patens
PRCOL_00003253 Prasinoderma coloniale
Prupe.1G566200 Prunus persica
Psat2g131720 Pisum sativum
PSO017G1582 Papaver somniferum
QL02p092646 Quercus lobata
QL03p073750 Quercus lobata
QL06p011620 Quercus lobata
RcHm_v2.0_Chr2g0139531 Rosa chinensis
RcHm_v2.0_Chr2g0139541 Rosa chinensis
RcHm_v2.0_Chr7g0212391 Rosa chinensis
Rhsim09G0126000 Rhododendron simsii
Sabra08G0073600 Salix brachista
SalBow2G3373 Salvia bowleyana
Sc04g0007480 Simmondsia chinensis
Sed0018680 Sechium edule
SEGI_04122 Sequoiadendron giganteum
SEGI_35565 Sequoiadendron giganteum
SGA_v2.0_scaffold16G07808 Striga asiatica
SGA_v2.0_scaffold16G07809 Striga asiatica
SGA_v2.0_scaffold85G26791 Striga asiatica
SHI01330 Sapria himalayana
SMO358G0268 Selaginella moellendorffii
Solyc05g012090.4 Solanum lycopersicum
Sopen05g006880 Solanum pennellii
Sp5g24250 Schrenkiella parvula
Sp7g27800 Schrenkiella parvula
TAR371G0727 Trochodendron aralioides
TAR629G1144 Trochodendron aralioides
THA.LOC104821999 Tarenaya hassleriana
Thecc.02G327500 Theobroma cacao
Thecc.02G327800 Theobroma cacao
Thhalv10019460m.g Eutrema salsugineum
Thhalv10024845m.g Eutrema salsugineum
TPR.G23155 Trifolium pratense
TPR.G23738 Trifolium pratense
TWI75G0045 Tripterygium wilfordii
TWI79G0826 Tripterygium wilfordii
unitig_22.g6894 Utricularia gibba
vmacro01311 Vaccinium macrocarpon
VMungo1215G0332 Vigna mungo
Zm00001eb319990 Zea mays

User provided reference genes

Program Settings