Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p00270 Brassica napus
A07p26090 Brassica napus
A09p54640 Brassica napus
Aa31LG1G29010 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.1353 Anthoceros agrestis
Actinidia32220 Actinidia chinensis
Ah.02g128370 Amaranthus hybridus
AL4G47260 Arabidopsis lyrata
AL5G45570 Arabidopsis lyrata
Aqoxy2G02950 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.77XVAG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8KN71Z Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.EEQ3S4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.U5VDRT Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YEW5FF Arachis hypogaea
AT2G47690 Arabidopsis thaliana
AT3G62790 Arabidopsis thaliana
ATR0796G245 Amborella trichopoda
AUR62015428 Chenopodium quinoa
BcaB02g07318 Brassica carinata
BcaB02g08753 Brassica carinata
BcaC02g12549 Brassica carinata
BcaC07g40762 Brassica carinata
BcaC07g42731 Brassica carinata
BcaC08g45239 Brassica carinata
BcaNung06420 Brassica carinata
BolC4t21665H Brassica oleracea
BolC6t38010H Brassica oleracea
BraA05t19024Z Brassica rapa
BraA07t30257Z Brassica rapa
BraA09t40875Z Brassica rapa
C04p00180 Brassica napus
C06p28410 Brassica napus
C08p37540 Brassica napus
CAN.G652.1 Capsicum annuum
CANSAT25G2283 Cannabis sativa
CARHR143080 Cardamine hirsuta
CARHR173060 Cardamine hirsuta
Carub.0004s3041 Capsella rubella
Carub.0005s2944 Capsella rubella
CBR_g52287 Chara braunii
Cc04_g11150 Coffea canephora
CDE02G3260 Ceratophyllum demersum
CDE09G0321 Ceratophyllum demersum
Cfa005919 Carpinus fangiana
Ciclev10033216m.g Citrus clementina
CiPaw.07G108200 Carya illinoinensis
CiPaw.08G095500 Carya illinoinensis
ClCG10G010880 Citrullus lanatus
COL.COLO4_23352 Corchorus olitorius
Cpa.g.sc19.280 Carica papaya
CsaV3_4G000760 Cucumis sativus L.
CSS0034435 Camellia sinensis var. sinensis
DCAR_027069 Daucus carota
Dinv29760 Davidia involucrata
Dinv44366 Davidia involucrata
Duzib133G0273 Durio zibethinus
Duzib211G0376 Durio zibethinus
ECA246G3542 Erigeron canadensis
EL10Ac3g05917 Beta vulgaris
Eucgr.K03475 Eucalyptus grandis
FAN15G2088 Fragaria x ananassa
FAN20G0551 Fragaria x ananassa
FAN27G2170 Fragaria x ananassa
FvH4_2g25680 Fragaria vesca
Glyma.03G214500 Glycine max
Glyma.19G211200 Glycine max
Gohir.A08G042400 Gossypium hirsutum
Gohir.A08G075800 Gossypium hirsutum
Gohir.A12G130700 Gossypium hirsutum
Gohir.D08G052200 Gossypium hirsutum
Gohir.D08G085200 Gossypium hirsutum
Gohir.D12G134600 Gossypium hirsutum
Gorai.004G052300 Gossypium raimondii
Gorai.004G089700 Gossypium raimondii
Gorai.008G145500 Gossypium raimondii
GSVIVG01035146001 Vitis vinifera
HanXRQChr06g0173941 Helianthus annuus
HanXRQChr08g0223921 Helianthus annuus
HanXRQChr09g0263651 Helianthus annuus
HanXRQChr17g0538761 Helianthus annuus
Haze_04931 Corylus avellana
Hma1.2p1_1185F.1_g264980 Hydrangea macrophylla
HPP92_017223 Vanilla planifolia
Hund11874 Selenicereus undatus
Lalb_Chr04g0259841 Lupinus albus
Lalb_Chr15g0078521 Lupinus albus
Lj1g0012977 Lotus japonicus
Lsat_1_v5_gn_3_24761 Lactuca sativa
Manes.01G218400 Manihot esculenta
Manes.05G062300 Manihot esculenta
Mapoly0155s0025 Marchantia polymorpha
MBI18_g06871_MAGBIO Magnolia biondii
MCO16G429 Micromonas commoda
MD02G1095800 Malus domestica
MD03G1287600 Malus domestica
Medtr8g058533 Medicago truncatula
MELO3C017960.2 Cucumis melo
Migut.D00213 Erythranthe guttata
Migut.D02475 Erythranthe guttata
Nitab4.5_0000805g0100 Nicotiana tabacum
Nitab4.5_0011375g0020 Nicotiana tabacum
Nn4g25791 Nelumbo nucifera
Oeu054123.1 Olea europaea
Os08g0556600 Oryza sativa ssp. japonica
Peaxi162Scf00589g00224 Petunia axillaris
PGR042G0105 Punica granatum
PGSC0003DMG400028681 Solanum tuberosum
Phvul.001G207200 Phaseolus vulgaris
Potri.002G204800 Populus trichocarpa
Potri.014G129600 Populus trichocarpa
Pp3c11_13470 Physcomitrium patens
Pp3c7_20680 Physcomitrium patens
Prupe.8G260800 Prunus persica
Psat3g022120 Pisum sativum
PSO170G2085 Papaver somniferum
PSO210G2815 Papaver somniferum
PSO210G7006 Papaver somniferum
PSO832G3231 Papaver somniferum
QL12p028550 Quercus lobata
RcHm_v2.0_Chr6g0293941 Rosa chinensis
Sabra14G0096200 Salix brachista
SalBow3G4056 Salvia bowleyana
Sc25g0004000 Simmondsia chinensis
Sed0018249 Sechium edule
Sed0019318 Sechium edule
SHI19781 Sapria himalayana
Solyc11g005880.2 Solanum lycopersicum
Sopen11g001830 Solanum pennellii
Sp4g29630 Schrenkiella parvula
Sp5g00730 Schrenkiella parvula
TAR365G0183 Trochodendron aralioides
TAR370G0003 Trochodendron aralioides
TAR633G1838 Trochodendron aralioides
THA.LOC104817499 Tarenaya hassleriana
Thecc.01G299700 Theobroma cacao
Thhalv10001702m.g Eutrema salsugineum
Thhalv10006347m.g Eutrema salsugineum
TPR.G9599 Trifolium pratense
TWI14G1007 Tripterygium wilfordii
TWI23G0618 Tripterygium wilfordii
unitig_0.g663 Utricularia gibba
vmacro03691 Vaccinium macrocarpon
Zm00001eb039670 Zea mays

User provided reference genes

Program Settings