Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p27680 Brassica napus
Aa31LG4G17050 Aethionema arabicum
Aa31LG4G17060 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.970 Anthoceros agrestis
Actinidia19387 Actinidia chinensis
Actinidia19388 Actinidia chinensis
Actinidia25613 Actinidia chinensis
AL5G27880 Arabidopsis lyrata
Aqoxy5G03583 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.9N92ER Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.D4E4RT Arachis hypogaea
AT3G48470 Arabidopsis thaliana
ATR0239G001 Amborella trichopoda
ATR0824G104 Amborella trichopoda
Atru.chr9.1012 Acer truncatum
AUR62001278 Chenopodium quinoa
AUR62025728 Chenopodium quinoa
BcaB02g10650 Brassica carinata
BcaC01g02344 Brassica carinata
BolC3t18905H Brassica oleracea
BraA06t25704Z Brassica rapa
C03p66340 Brassica napus
CAN.G1110.40 Capsicum annuum
CANSAT80G2773 Cannabis sativa
CARHR157230 Cardamine hirsuta
Carub.0005s1465 Capsella rubella
Ca_16089_v3 Cicer arietinum L.
CBR_g45764 Chara braunii
CBR_g52378 Chara braunii
Cc04_g10370 Coffea canephora
CDE02G2587 Ceratophyllum demersum
Cfa018892 Carpinus fangiana
Ciclev10018616m.g Citrus clementina
CiPaw.12G035700 Carya illinoinensis
ClCG03G003490 Citrullus lanatus
COL.COLO4_09267 Corchorus olitorius
Cpa.g.sc52.34 Carica papaya
Cpa.g.sc52.35 Carica papaya
Cre03.g186550 Chlamydomonas reinhardtii
CsaV3_1G009290 Cucumis sativus L.
CSS0005553 Camellia sinensis var. sinensis
CSS0037650 Camellia sinensis var. sinensis
DCAR_021603 Daucus carota
Dinv38469 Davidia involucrata
Duzib084G0239 Durio zibethinus
ECA246G0437 Erigeron canadensis
ECA246G2102 Erigeron canadensis
EL10Ac7g18074 Beta vulgaris
Eucgr.B00148 Eucalyptus grandis
Eucgr.L01337 Eucalyptus grandis
FAN04G2946 Fragaria x ananassa
FAN13G2650 Fragaria x ananassa
FAN18G3380 Fragaria x ananassa
FvH4_3g25520 Fragaria vesca
FvH4_5g07361 Fragaria vesca
FvH4_5g07460 Fragaria vesca
FvH4_5g07461 Fragaria vesca
FvH4_5g07490 Fragaria vesca
Glyma.04G193000 Glycine max
Glyma.06G172900 Glycine max
Gohir.A07G053500 Gossypium hirsutum
Gohir.D07G057900 Gossypium hirsutum
Gorai.001G061400 Gossypium raimondii
GSVIVG01007540001 Vitis vinifera
HanXRQChr05g0154741 Helianthus annuus
Haze_07276 Corylus avellana
Hma1.2p1_0123F.1_g058130 Hydrangea macrophylla
HPP92_024695 Vanilla planifolia
Hund18539 Selenicereus undatus
Lalb_Chr08g0236961 Lupinus albus
Lj1g0000662 Lotus japonicus
Lj9C475T6 Lonicera japonica
Lsat_1_v5_gn_0_22080 Lactuca sativa
Lsat_1_v5_gn_1_114041 Lactuca sativa
Lsat_1_v5_gn_5_13240 Lactuca sativa
Manes.06G115300 Manihot esculenta
Mapoly0075s0016 Marchantia polymorpha
MBI11_g36316_MAGBIO Magnolia biondii
MCO03G522 Micromonas commoda
MD00G1179800 Malus domestica
MD06G1153900 Malus domestica
MD06G1154000 Malus domestica
MD14G1163600 Malus domestica
Medtr3g075100 Medicago truncatula
MELO3C002332.2 Cucumis melo
Migut.I00475 Erythranthe guttata
MSTRG.11293 Avicennia marina
Nitab4.5_0000955g0070 Nicotiana tabacum
Nitab4.5_0002775g0020 Nicotiana tabacum
Nn3g20975 Nelumbo nucifera
Nn4g22461 Nelumbo nucifera
Nn7g38107 Nelumbo nucifera
Nn8g40428 Nelumbo nucifera
Oeu007006.1 Olea europaea
Oeu057221.1 Olea europaea
Os02g0598400 Oryza sativa ssp. japonica
Os02g0598800 Oryza sativa ssp. japonica
Os02g0599100 Oryza sativa ssp. japonica
Os02g0600000 Oryza sativa ssp. japonica
Peaxi162Scf00536g00422 Petunia axillaris
PGR083G1937 Punica granatum
PGSC0003DMG400025026 Solanum tuberosum
Phvul.009G168800 Phaseolus vulgaris
Potri.015G090700 Populus trichocarpa
Pp3c24_17160 Physcomitrium patens
PRCOL_00001784 Prasinoderma coloniale
Prupe.5G157000 Prunus persica
Psat5g141880 Pisum sativum
PSO063G1058 Papaver somniferum
QL10p005060 Quercus lobata
QL10p005098 Quercus lobata
RcHm_v2.0_Chr0c39g0503251 Rosa chinensis
RcHm_v2.0_Chr1g0339741 Rosa chinensis
RcHm_v2.0_Chr1g0353191 Rosa chinensis
RcHm_v2.0_Chr4g0412201 Rosa chinensis
RcHm_v2.0_Chr6g0278011 Rosa chinensis
RcHm_v2.0_Chr7g0191161 Rosa chinensis
Rhsim08G0185000 Rhododendron simsii
Sabra15G0112800 Salix brachista
SalBow1G1130 Salvia bowleyana
SalBow1G2179 Salvia bowleyana
SalBow1G6050 Salvia bowleyana
SalBow5G2547 Salvia bowleyana
SalBow5G3736 Salvia bowleyana
Sc10g0010350 Simmondsia chinensis
Sed0011232 Sechium edule
SEGI_02888 Sequoiadendron giganteum
SEGI_05777 Sequoiadendron giganteum
SGA_v2.0_scaffold457G51932 Striga asiatica
SGA_v2.0_scaffold50G18602 Striga asiatica
SHI10647 Sapria himalayana
SMO367G0489 Selaginella moellendorffii
Solyc10g006780.4 Solanum lycopersicum
Sopen10g002700 Solanum pennellii
Sp5g13560 Schrenkiella parvula
TAR629G2346 Trochodendron aralioides
THA.LOC104818196 Tarenaya hassleriana
Thecc.03G122800 Theobroma cacao
Thhalv10010098m.g Eutrema salsugineum
TPR.G13978 Trifolium pratense
TWI14G1297 Tripterygium wilfordii
vmacro19239 Vaccinium macrocarpon
VMungo1309G0017 Vigna mungo
Zm00001eb246300 Zea mays

User provided reference genes

Program Settings