Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p09440 Brassica napus
A05p42050 Brassica napus
A10p20340 Brassica napus
Aa31LG5G16450 Aethionema arabicum
Actinidia23488 Actinidia chinensis
Ah.04g154490 Amaranthus hybridus
AL3G16790 Arabidopsis lyrata
AL6G30830 Arabidopsis lyrata
Aqoxy2G03348 Aquilegia oxysepala
Aqoxy5G00503 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0RM5BV Arachis hypogaea
AT3G05980 Arabidopsis thaliana
AT5G19340 Arabidopsis thaliana
ATR0626G396 Amborella trichopoda
Atru.chr4.2515 Acer truncatum
AUR62038093 Chenopodium quinoa
AUR62038640 Chenopodium quinoa
BcaB01g04866 Brassica carinata
BcaB01g04867 Brassica carinata
BcaB01g05141 Brassica carinata
BcaB08g36581 Brassica carinata
BcaC04g18576 Brassica carinata
BcaC05g30072 Brassica carinata
BcaC09g47869 Brassica carinata
BcaNung07026 Brassica carinata
BolC1t05645H Brassica oleracea
BolC3t13571H Brassica oleracea
BolC5t34787H Brassica oleracea
BolC9t58548H Brassica oleracea
BraA01t04457Z Brassica rapa
BraA03t10262Z Brassica rapa
BraA05t22925Z Brassica rapa
BraA10t44105Z Brassica rapa
C03p11020 Brassica napus
C05p61280 Brassica napus
C09p56940 Brassica napus
CAN.G668.8 Capsicum annuum
CAN.G873.5 Capsicum annuum
CANSAT78G1299 Cannabis sativa
CARHR080490 Cardamine hirsuta
CARHR193620 Cardamine hirsuta
Carub.0003s0539 Capsella rubella
Carub.0006s1768 Capsella rubella
Ca_10924_v3 Cicer arietinum L.
Cc03_g03470 Coffea canephora
Cfa015617 Carpinus fangiana
Ciclev10005615m.g Citrus clementina
CiPaw.01G163700 Carya illinoinensis
CiPaw.02G095300 Carya illinoinensis
ClCG06G006000 Citrullus lanatus
COL.COLO4_06196 Corchorus olitorius
Cpa.g.sc8.322 Carica papaya
CsaV3_6G038280 Cucumis sativus L.
CSS0023930 Camellia sinensis var. sinensis
DCAR_002395 Daucus carota
DCAR_024599 Daucus carota
DCAR_030618 Daucus carota
Dinv38425 Davidia involucrata
Duzib052G0196 Durio zibethinus
Duzib151G0158 Durio zibethinus
Duzib212G0790 Durio zibethinus
ECA234G2268 Erigeron canadensis
EL10As3g23360 Beta vulgaris
Eucgr.B01092 Eucalyptus grandis
FAN07G2107 Fragaria x ananassa
FAN12G4146 Fragaria x ananassa
FAN17G2349 Fragaria x ananassa
FAN22G0945 Fragaria x ananassa
FvH4_4g15060 Fragaria vesca
Glyma.10G249900 Glycine max
Glyma.20G143700 Glycine max
Gohir.A09G214300 Gossypium hirsutum
Gohir.D09G216800 Gossypium hirsutum
Gorai.006G237300 Gossypium raimondii
HanXRQChr04g0110301 Helianthus annuus
HanXRQChr10g0296561 Helianthus annuus
Hma1.2p1_0511F.1_g168910 Hydrangea macrophylla
Hma1.2p1_0995F.1_g245620 Hydrangea macrophylla
Lalb_Chr06g0160581 Lupinus albus
Lj3P740T18 Lonicera japonica
Lj5g0028012 Lotus japonicus
Lj6P597T84 Lonicera japonica
Lsat_1_v5_gn_5_148500 Lactuca sativa
Manes.03G181200 Manihot esculenta
Manes.15G026700 Manihot esculenta
MBI17_g31753_MAGBIO Magnolia biondii
MD13G1188400 Malus domestica
MD16G1188800 Malus domestica
Medtr1g104840 Medicago truncatula
MELO3C014491.2 Cucumis melo
Migut.N00171 Erythranthe guttata
MSTRG.21844 Avicennia marina
MSTRG.4014 Avicennia marina
Nitab4.5_0000260g0100 Nicotiana tabacum
Nitab4.5_0000321g0080 Nicotiana tabacum
Nitab4.5_0001545g0020 Nicotiana tabacum
Nitab4.5_0007609g0020 Nicotiana tabacum
Nn1g02242 Nelumbo nucifera
Nn1g06084 Nelumbo nucifera
Nn3g20708 Nelumbo nucifera
Nn4g26263 Nelumbo nucifera
Nn5g28878 Nelumbo nucifera
Oeu029026.1 Olea europaea
Oeu037551.1 Olea europaea
Peaxi162Scf00437g00052 Petunia axillaris
Peaxi162Scf00642g00022 Petunia axillaris
PGR004G1499 Punica granatum
PGR142G0441 Punica granatum
PGSC0003DMG400011822 Solanum tuberosum
PGSC0003DMG400031851 Solanum tuberosum
Phvul.007G054700 Phaseolus vulgaris
Potri.008G150300 Populus trichocarpa
Potri.010G090700 Populus trichocarpa
Prupe.1G155500 Prunus persica
Psat6g208720 Pisum sativum
PSO302G0248 Papaver somniferum
QL06p003360 Quercus lobata
RcHm_v2.0_Chr4g0416801 Rosa chinensis
Rhsim04G0205100 Rhododendron simsii
Sabra08G0114400 Salix brachista
Sabra10G0052800 Salix brachista
Sc13g0004240 Simmondsia chinensis
Sc19g0004310 Simmondsia chinensis
Sed0008919 Sechium edule
Sed0012211 Sechium edule
SGA_v2.0_scaffold10G05107 Striga asiatica
SGA_v2.0_scaffold237G43792 Striga asiatica
SGA_v2.0_scaffold39G15291 Striga asiatica
Solyc06g054280.1 Solanum lycopersicum
Solyc09g075740.1 Solanum lycopersicum
Sopen06g019400 Solanum pennellii
Sopen09g030550 Solanum pennellii
Sp3g04920 Schrenkiella parvula
Sp6g25070 Schrenkiella parvula
TAR362G0899 Trochodendron aralioides
THA.LOC104802759 Tarenaya hassleriana
THA.LOC104818779 Tarenaya hassleriana
Thecc.04G227300 Theobroma cacao
Thhalv10016073m.g Eutrema salsugineum
Thhalv10021379m.g Eutrema salsugineum
TPR.G5529 Trifolium pratense
TWI09G0254 Tripterygium wilfordii
TWI53G0458 Tripterygium wilfordii
VMungo0720G0147 Vigna mungo

User provided reference genes

Program Settings