Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
Aa31LG2G3950 Aethionema arabicum
Actinidia01983 Actinidia chinensis
Actinidia07816 Actinidia chinensis
Ah.11g047990 Amaranthus hybridus
Ah.15g098240 Amaranthus hybridus
AL5G19390 Arabidopsis lyrata
Aqoxy3G03583 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.8S7SHD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UWUI2N Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XVT01H Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Y71GGS Arachis hypogaea
ATR0064G106 Amborella trichopoda
ATR0681G067 Amborella trichopoda
AUR62008499 Chenopodium quinoa
AUR62021593 Chenopodium quinoa
AUR62043100 Chenopodium quinoa
CAN.G979.11 Capsicum annuum
CAN.G979.12 Capsicum annuum
Ca_13809_v3 Cicer arietinum L.
Cc07_g04000 Coffea canephora
CDE10G0382 Ceratophyllum demersum
Cfa007639 Carpinus fangiana
Cfa019301 Carpinus fangiana
Ciclev10020317m.g Citrus clementina
CiPaw.04G057500 Carya illinoinensis
CiPaw.11G050100 Carya illinoinensis
ClCG06G015820 Citrullus lanatus
COL.COLO4_22223 Corchorus olitorius
Cpa.g.sc94.10 Carica papaya
CsaV3_1G002740 Cucumis sativus L.
CSS0002601 Camellia sinensis var. sinensis
DCAR_011050 Daucus carota
Dinv33817 Davidia involucrata
Dinv34960 Davidia involucrata
Dinv38787 Davidia involucrata
Duzib205G0201 Durio zibethinus
ECA232G0957 Erigeron canadensis
ECA232G4448 Erigeron canadensis
ECA238G3864 Erigeron canadensis
ECA246G3789 Erigeron canadensis
EL10Ac5g11101 Beta vulgaris
Eucgr.I01975 Eucalyptus grandis
FAN08G2293 Fragaria x ananassa
FAN11G0817 Fragaria x ananassa
FAN16G3714 Fragaria x ananassa
FAN18G2456 Fragaria x ananassa
FAN21G2192 Fragaria x ananassa
FAN25G3767 Fragaria x ananassa
FvH4_3g36400 Fragaria vesca
FvH4_5g14276 Fragaria vesca
Glyma.08G242800 Glycine max
Glyma.18G265000 Glycine max
Gohir.A12G180900 Gossypium hirsutum
Gohir.D07G074000 Gossypium hirsutum
Gohir.D12G183566 Gossypium hirsutum
Gohir.D12G183632 Gossypium hirsutum
Gorai.001G078200 Gossypium raimondii
Gorai.008G196900 Gossypium raimondii
GSVIVG01007924001 Vitis vinifera
GSVIVG01011505001 Vitis vinifera
HanXRQChr05g0157201 Helianthus annuus
HanXRQChr14g0426851 Helianthus annuus
HanXRQChr14g0448751 Helianthus annuus
Haze_07684 Corylus avellana
Haze_14458 Corylus avellana
Hma1.2p1_0481F.1_g161950 Hydrangea macrophylla
HPP92_009883 Vanilla planifolia
HPP92_020440 Vanilla planifolia
Hund02603 Selenicereus undatus
Hund02604 Selenicereus undatus
Hund13159 Selenicereus undatus
Lalb_Chr17g0337031 Lupinus albus
Lalb_Chr23g0273001 Lupinus albus
Lj1g0005307 Lotus japonicus
Lj1g0008070 Lotus japonicus
Lj1g0011465 Lotus japonicus
Lju41C5T5 Lonicera japonica
Lsat_1_v5_gn_2_87740 Lactuca sativa
Lsat_1_v5_gn_3_13140 Lactuca sativa
Lsat_1_v5_gn_4_109821 Lactuca sativa
Lsat_1_v5_gn_4_109841 Lactuca sativa
Lsat_1_v5_gn_5_21940 Lactuca sativa
Lsat_1_v5_gn_5_21960 Lactuca sativa
Manes.01G098100 Manihot esculenta
MBI16_g09907_MAGBIO Magnolia biondii
MD00G1013500 Malus domestica
MD03G1090800 Malus domestica
MD14G1208900 Malus domestica
Medtr3g023750 Medicago truncatula
Medtr5g097950 Medicago truncatula
MELO3C017209.2 Cucumis melo
Migut.H00644 Erythranthe guttata
MSTRG.23894 Avicennia marina
MSTRG.3015 Avicennia marina
Nitab4.5_0000212g0170 Nicotiana tabacum
Nitab4.5_0007954g0010 Nicotiana tabacum
Nn3g17397 Nelumbo nucifera
Oeu010241.1 Olea europaea
Oeu062150.1 Olea europaea
Os10g0324600 Oryza sativa ssp. japonica
Peaxi162Scf00629g00420 Petunia axillaris
PGSC0003DMG400025138 Solanum tuberosum
Phvul.008G035000 Phaseolus vulgaris
Potri.017G091700 Populus trichocarpa
Prupe.2G102500 Prunus persica
Prupe.5G201200 Prunus persica
Prupe.6G075200 Prunus persica
Psat7g133400 Pisum sativum
PSO017G3052 Papaver somniferum
PSO302G0007 Papaver somniferum
PSO478G1432 Papaver somniferum
QL10p018718 Quercus lobata
RcHm_v2.0_Chr5g0065291 Rosa chinensis
RcHm_v2.0_Chr7g0182621 Rosa chinensis
Rhsim08G0074200 Rhododendron simsii
Rhsim10G0044300 Rhododendron simsii
Rhsim10G0044600 Rhododendron simsii
Sabra17G0080700 Salix brachista
SalBow1G1470 Salvia bowleyana
Sc04g0003090 Simmondsia chinensis
Sc10g0003210 Simmondsia chinensis
Sed0003803 Sechium edule
Sed0005854 Sechium edule
SGA_v2.0_scaffold52G19178 Striga asiatica
Solyc02g067070.4 Solanum lycopersicum
Sopen02g016260 Solanum pennellii
TAR371G0084 Trochodendron aralioides
TAR374G0076 Trochodendron aralioides
TAR622G0939 Trochodendron aralioides
TAR629G0541 Trochodendron aralioides
TAR636G0507 Trochodendron aralioides
TAR636G1204 Trochodendron aralioides
Thecc.03G097300 Theobroma cacao
Thecc.04G092200 Theobroma cacao
Thhalv10005570m.g Eutrema salsugineum
Thhalv10028085m.g Eutrema salsugineum
TPR.G12226 Trifolium pratense
TWI34G1812 Tripterygium wilfordii
TWI60G0661 Tripterygium wilfordii
vmacro05657 Vaccinium macrocarpon
vmacro18154 Vaccinium macrocarpon
VMungo1383G1830 Vigna mungo
VMungo1383G2795 Vigna mungo
Zm00001eb224070 Zea mays

User provided reference genes

Program Settings