Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p04030 Brassica napus
A10p28110 Brassica napus
Aa31LG3G17910 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.1599 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.3436 Anthoceros agrestis
Actinidia19951 Actinidia chinensis
Actinidia36586 Actinidia chinensis
Ah.06g191770 Amaranthus hybridus
AL6G19360 Arabidopsis lyrata
Aqoxy6G00109 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.4364K7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.9Z2GEU Arachis hypogaea
AT5G08630 Arabidopsis thaliana
ATR0721G071 Amborella trichopoda
ATR0737G007 Amborella trichopoda
ATR1136G012 Amborella trichopoda
Atru.chr4.1140 Acer truncatum
Atru.chr4.1215 Acer truncatum
AUR62004810 Chenopodium quinoa
AUR62036029 Chenopodium quinoa
BcaB01g05651 Brassica carinata
BcaB08g37236 Brassica carinata
BolC9t59579H Brassica oleracea
BraA03t09746Z Brassica rapa
BraA10t44860Z Brassica rapa
C03p04490 Brassica napus
C09p68310 Brassica napus
CAN.G1156.53 Capsicum annuum
CAN.G696.6 Capsicum annuum
CANSAT54G2070 Cannabis sativa
CARHR204350 Cardamine hirsuta
Carub.0006s0762 Capsella rubella
Ca_17595_v3 Cicer arietinum L.
CBR_g15970 Chara braunii
Cc00_g05550 Coffea canephora
CDE06G1179 Ceratophyllum demersum
CDE08G1591 Ceratophyllum demersum
Cfa002238 Carpinus fangiana
Ciclev10025072m.g Citrus clementina
CiPaw.03G253500 Carya illinoinensis
CiPaw.04G179100 Carya illinoinensis
ClCG02G000120 Citrullus lanatus
Cpa.g.c42282 Carica papaya
Cpa.g.sc37.82 Carica papaya
CsaV3_2G019800 Cucumis sativus L.
CSS0003875 Camellia sinensis var. sinensis
CSS0004797 Camellia sinensis var. sinensis
DCAR_009584 Daucus carota
DCAR_019997 Daucus carota
Dinv16800 Davidia involucrata
Duzib147G1025 Durio zibethinus
ECA233G5772 Erigeron canadensis
ECA247G0659 Erigeron canadensis
EL10Ac4g08973 Beta vulgaris
Eucgr.I00008 Eucalyptus grandis
FAN19G1780 Fragaria x ananassa
FAN23G1877 Fragaria x ananassa
FAN26G1898 Fragaria x ananassa
FAN28G0381 Fragaria x ananassa
FvH4_1g25450 Fragaria vesca
Glyma.05G197300 Glycine max
Glyma.06G159700 Glycine max
Glyma.07G026800 Glycine max
Glyma.08G004700 Glycine max
Gohir.A05G376400 Gossypium hirsutum
Gohir.D04G039600 Gossypium hirsutum
Gorai.012G044600 Gossypium raimondii
GSVIVG01022419001 Vitis vinifera
HanXRQChr02g0043081 Helianthus annuus
Haze_25418 Corylus avellana
Haze_25419 Corylus avellana
Hma1.2p1_0057F.1_g032080 Hydrangea macrophylla
HPP92_011421 Vanilla planifolia
HPP92_027054 Vanilla planifolia
Hund06895 Selenicereus undatus
Hund22177 Selenicereus undatus
Lalb_Chr12g0202821 Lupinus albus
Lalb_Chr13g0296831 Lupinus albus
Lj4C816G5 Lonicera japonica
Lj4g0026114 Lotus japonicus
Lsat_1_v5_gn_5_69540 Lactuca sativa
Manes.13G076600 Manihot esculenta
Mapoly0096s0060 Marchantia polymorpha
MBI07_g10939_MAGBIO Magnolia biondii
MD15G1138200 Malus domestica
Medtr8g095210 Medicago truncatula
MELO3C023202.2 Cucumis melo
Migut.H00795 Erythranthe guttata
MSTRG.23501 Avicennia marina
Nitab4.5_0000496g0030 Nicotiana tabacum
Nitab4.5_0002704g0040 Nicotiana tabacum
Nn1g08341 Nelumbo nucifera
Oeu011013.3 Olea europaea
Oeu037875.1 Olea europaea
Os02g0556900 Oryza sativa ssp. japonica
Os04g0439300 Oryza sativa ssp. japonica
Os04g0439400 Oryza sativa ssp. japonica
Peaxi162Scf00525g00059 Petunia axillaris
PGR119G0862 Punica granatum
PGR142G2743 Punica granatum
PGSC0003DMG400023442 Solanum tuberosum
Phvul.002G277800 Phaseolus vulgaris
Phvul.009G157400 Phaseolus vulgaris
Potri.004G138900 Populus trichocarpa
Potri.019G008541 Populus trichocarpa
Pp3c1_29080 Physcomitrium patens
Pp3c1_29082 Physcomitrium patens
Pp3c2_17910 Physcomitrium patens
Prupe.4G281500 Prunus persica
Psat7g041880 Pisum sativum
Psat7g208160 Pisum sativum
PSO170G0098 Papaver somniferum
PSO782G1219 Papaver somniferum
QL10p038974 Quercus lobata
RcHm_v2.0_Chr2g0123471 Rosa chinensis
Rhsim10G0123800 Rhododendron simsii
Sabra01G0147700 Salix brachista
Sabra04G0089200 Salix brachista
Sabra19G0006900 Salix brachista
Sc09g0004330 Simmondsia chinensis
Sed0017542 Sechium edule
SEGI_19215 Sequoiadendron giganteum
SGA_v2.0_scaffold211G42145 Striga asiatica
SGA_v2.0_scaffold54G19585 Striga asiatica
SHI11418 Sapria himalayana
SMO144G0202 Selaginella moellendorffii
SMO169G0082 Selaginella moellendorffii
SMO169G0116 Selaginella moellendorffii
Solyc05g056530.4 Solanum lycopersicum
Sopen05g027540 Solanum pennellii
Sopen05g034930 Solanum pennellii
Sp6g34240 Schrenkiella parvula
Sp6g34250 Schrenkiella parvula
TAR381G1173 Trochodendron aralioides
THA.LOC104818408 Tarenaya hassleriana
Thecc.01G233500 Theobroma cacao
Thhalv10012814m.g Eutrema salsugineum
TPR.G12784 Trifolium pratense
TWI75G0018 Tripterygium wilfordii
unitig_899.g14489 Utricularia gibba
vmacro12733 Vaccinium macrocarpon
VMungo1309G1202 Vigna mungo
VMungo1383G0740 Vigna mungo
Zm00001eb182070 Zea mays

User provided reference genes

Program Settings