Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p02820 Brassica napus
Aa31LG5G11280 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.4747 Anthoceros agrestis
Actinidia20812 Actinidia chinensis
Actinidia32581 Actinidia chinensis
Actinidia35793 Actinidia chinensis
Ah.04g166670 Amaranthus hybridus
AL6G10010 Arabidopsis lyrata
Aqoxy2G00608 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.6F524X Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.M7CUXC Arachis hypogaea
AT5G01010 Arabidopsis thaliana
Atru.chr8.19_Atru.chr8.20 Acer truncatum
AUR62006464 Chenopodium quinoa
AUR62029819 Chenopodium quinoa
AUR62029820 Chenopodium quinoa
BcaB01g06128 Brassica carinata
BcaB01g06129 Brassica carinata
BcaB01g06261 Brassica carinata
BcaC03g13099 Brassica carinata
BNapus_Darmor_BZH_scaffold_209p00020 Brassica napus
BolC2t05996H Brassica oleracea
BolC3t12584H Brassica oleracea
BraA02t04669Z Brassica rapa
BraA03t09386Z Brassica rapa
BraA07t28080Z Brassica rapa
CAN.G455.1 Capsicum annuum
CANSAT21G2189 Cannabis sativa
CARHR212360 Cardamine hirsuta
Carub.0005s0002 Capsella rubella
Carub.0024s0001 Capsella rubella
Ca_23103_v3 Cicer arietinum L.
CBR_g279 Chara braunii
Cc06_g00030 Coffea canephora
CDE06G0216 Ceratophyllum demersum
CDE07G0273 Ceratophyllum demersum
CDE07G0892 Ceratophyllum demersum
CDE07G0921 Ceratophyllum demersum
CDE07G1760 Ceratophyllum demersum
Cfa016978 Carpinus fangiana
Ciclev10011748m.g Citrus clementina
CiPaw.09G224300 Carya illinoinensis
CiPaw.09G224400 Carya illinoinensis
ClCG04G005100 Citrullus lanatus
COL.COLO4_20050 Corchorus olitorius
Cpa.g.sc1919.1 Carica papaya
Cre02.g117950 Chlamydomonas reinhardtii
CsaV3_4G013540 Cucumis sativus L.
CSS0045446 Camellia sinensis var. sinensis
DCAR_023955 Daucus carota
Dinv16915 Davidia involucrata
Duzib151G1109 Durio zibethinus
Duzib268G1588 Durio zibethinus
ECA236G4239 Erigeron canadensis
ECA248G3767 Erigeron canadensis
EL10Ac4g10395 Beta vulgaris
Eucgr.K01318 Eucalyptus grandis
FAN02G3856 Fragaria x ananassa
FAN05G1148 Fragaria x ananassa
FAN09G2324 Fragaria x ananassa
FAN14G0475 Fragaria x ananassa
FAN19G0526 Fragaria x ananassa
FvH4_6g09090 Fragaria vesca
Glyma.03G000700 Glycine max
Glyma.16G222300 Glycine max
Gohir.A02G000400 Gossypium hirsutum
Gohir.D02G000700 Gossypium hirsutum
Gorai.005G001100 Gossypium raimondii
GSVIVG01029830001 Vitis vinifera
HanXRQChr11g0329321 Helianthus annuus
HanXRQChr14g0445831 Helianthus annuus
Haze_21230 Corylus avellana
Hma1.2p1_1020F.1_g248500 Hydrangea macrophylla
Hma1.2p1_1020F.1_g248520 Hydrangea macrophylla
Hund19374 Selenicereus undatus
Lalb_Chr13g0290271 Lupinus albus
Lj2A53G27 Lonicera japonica
Lj3g0026233 Lotus japonicus
Lsat_1_v5_gn_4_157281 Lactuca sativa
Lsat_1_v5_gn_5_153501 Lactuca sativa
Lsat_1_v5_gn_8_105921 Lactuca sativa
Lsat_1_v5_gn_8_108900 Lactuca sativa
Lsat_1_v5_gn_8_9201 Lactuca sativa
Manes.08G165900 Manihot esculenta
Manes.09G119600 Manihot esculenta
Mapoly0045s0012 Marchantia polymorpha
MBI03_g45858_MAGBIO Magnolia biondii
MBI07_g27400_MAGBIO Magnolia biondii
MBI15_g33472_MAGBIO Magnolia biondii
MD00G1001200 Malus domestica
MD04G1181300 Malus domestica
MD12G1196200 Malus domestica
Medtr8g005040 Medicago truncatula
MELO3C025278.2 Cucumis melo
Migut.J00001 Erythranthe guttata
MSTRG.5474 Avicennia marina
Nitab4.5_0002139g0070 Nicotiana tabacum
Nitab4.5_0003037g0020 Nicotiana tabacum
Nn5g26729 Nelumbo nucifera
Oeu027654.1 Olea europaea
Os05g0306000 Oryza sativa ssp. japonica
Peaxi162Scf00374g00623 Petunia axillaris
PGR004G2278 Punica granatum
Phvul.010G060400 Phaseolus vulgaris
Potri.016G143700 Populus trichocarpa
Pp3c6_1360 Physcomitrium patens
PRCOL_00004779 Prasinoderma coloniale
Prupe.6G300700 Prunus persica
Psat2g191240 Pisum sativum
PSO339G0748 Papaver somniferum
PSO384G1586 Papaver somniferum
QL07p030229 Quercus lobata
QL07p030634 Quercus lobata
RcHm_v2.0_Chr2g0142661 Rosa chinensis
RcHm_v2.0_Chr2g0163341 Rosa chinensis
RcHm_v2.0_Chr3g0459311 Rosa chinensis
RcHm_v2.0_Chr3g0481991 Rosa chinensis
RcHm_v2.0_Chr3g0494831 Rosa chinensis
RcHm_v2.0_Chr4g0423451 Rosa chinensis
Rhsim04G0119400 Rhododendron simsii
Sabra04G0159600 Salix brachista
Sabra04G0159700 Salix brachista
Sabra06G0088900 Salix brachista
Sabra12G0043200 Salix brachista
Sc02g0000100 Simmondsia chinensis
Sed0017962 Sechium edule
SEGI_25208 Sequoiadendron giganteum
SEGI_33787 Sequoiadendron giganteum
SGA_v2.0_scaffold85G26585 Striga asiatica
SMO198G0089 Selaginella moellendorffii
Solyc10g074690.2 Solanum lycopersicum
Sopen10g027170 Solanum pennellii
Sp6g41230 Schrenkiella parvula
TAR369G0292 Trochodendron aralioides
THA.LOC104816146 Tarenaya hassleriana
Thecc.04G061600 Theobroma cacao
Thhalv10013603m.g Eutrema salsugineum
TPR.G30733 Trifolium pratense
TWI74G0252 Tripterygium wilfordii
TWI77G0041 Tripterygium wilfordii
unitig_699.g19018 Utricularia gibba
vmacro08964 Vaccinium macrocarpon
VMungo0331G1207 Vigna mungo
Zm00001eb284640 Zea mays

User provided reference genes

Program Settings