Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p10500 Brassica napus
A10p18740 Brassica napus
Aa31LG1G13440 Aethionema arabicum
Actinidia26432 Actinidia chinensis
Actinidia27819 Actinidia chinensis
AL6G32940 Arabidopsis lyrata
Aqoxy7G04081 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.3D63PE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.698XEU Arachis hypogaea
AT5G21280 Arabidopsis thaliana
ATR0681G043 Amborella trichopoda
Atru.chr7.1814 Acer truncatum
AUR62032196 Chenopodium quinoa
AUR62036963 Chenopodium quinoa
BcaB01g04752 Brassica carinata
BcaB05g22758 Brassica carinata
BcaB08g36461 Brassica carinata
BcaC01g06616 Brassica carinata
BcaC03g13850 Brassica carinata
BcaC04g19528 Brassica carinata
BNapus_Darmor_BZH_scaffold_38p00940 Brassica napus
BolC2t07127H Brassica oleracea
BolC3t13679H Brassica oleracea
BolC9t58333H Brassica oleracea
BraA02t05631Z Brassica rapa
BraA03t10361Z Brassica rapa
BraA03t10362Z Brassica rapa
BraA10t43954Z Brassica rapa
C03p12080 Brassica napus
C09p54690 Brassica napus
CAN.G1059.3 Capsicum annuum
CANSAT25G2504 Cannabis sativa
CARHR191550 Cardamine hirsuta
Carub.0006s1962 Capsella rubella
Ca_13089_v3 Cicer arietinum L.
Ca_15799_v3 Cicer arietinum L.
Cc08_g07800 Coffea canephora
CDE05G3316 Ceratophyllum demersum
CDE05G3450 Ceratophyllum demersum
CDE11G0900 Ceratophyllum demersum
Cfa017841 Carpinus fangiana
Cfa023359 Carpinus fangiana
Ciclev10008490m.g Citrus clementina
CiPaw.16G068600 Carya illinoinensis
ClCG05G015950 Citrullus lanatus
ClCG08G009670 Citrullus lanatus
COL.COLO4_21169 Corchorus olitorius
Cpa.g.sc82.19 Carica papaya
CsaV3_4G036220 Cucumis sativus L.
CsaV3_6G031800 Cucumis sativus L.
CSS0041342 Camellia sinensis var. sinensis
DCAR_001248 Daucus carota
Dinv41845 Davidia involucrata
Duzib150G1003 Durio zibethinus
Duzib168G1397 Durio zibethinus
Duzib187G1454 Durio zibethinus
ECA234G4818 Erigeron canadensis
ECA236G4272 Erigeron canadensis
ECA240G0440 Erigeron canadensis
EL10Ac5g11257 Beta vulgaris
Eucgr.C00749 Eucalyptus grandis
FAN15G1397 Fragaria x ananassa
FAN20G0215 Fragaria x ananassa
FAN27G3126 Fragaria x ananassa
FvH4_2g37040 Fragaria vesca
Glyma.04G057900 Glycine max
Glyma.06G058600 Glycine max
Gohir.A05G037666 Gossypium hirsutum
Gohir.A06G081000 Gossypium hirsutum
Gohir.D05G039200 Gossypium hirsutum
Gohir.D06G080700 Gossypium hirsutum
Gorai.009G039700 Gossypium raimondii
Gorai.010G094100 Gossypium raimondii
GSVIVG01035506001 Vitis vinifera
HanXRQChr03g0067421 Helianthus annuus
HanXRQChr08g0228011 Helianthus annuus
HanXRQChr09g0261901 Helianthus annuus
HanXRQChr10g0309951 Helianthus annuus
Haze_13552 Corylus avellana
Haze_18367 Corylus avellana
Hma1.2p1_0920F.1_g236590 Hydrangea macrophylla
HPP92_013274 Vanilla planifolia
Hund02523 Selenicereus undatus
Lalb_Chr08g0244621 Lupinus albus
Lalb_Chr11g0063421 Lupinus albus
Lalb_Chr22g0349651 Lupinus albus
Lj1g0011388 Lotus japonicus
Lj7P206T8 Lonicera japonica
Manes.03G055700 Manihot esculenta
Manes.16G087800 Manihot esculenta
MD08G1046900 Malus domestica
MD15G1047100 Malus domestica
Medtr1g014750 Medicago truncatula
Medtr3g105580 Medicago truncatula
MELO3C016931.2 Cucumis melo
MELO3C026560.2 Cucumis melo
Migut.A00332 Erythranthe guttata
Migut.E01467 Erythranthe guttata
MSTRG.11768 Avicennia marina
Nitab4.5_0000508g0090 Nicotiana tabacum
Nitab4.5_0007212g0010 Nicotiana tabacum
Nn6g35650 Nelumbo nucifera
Nn8g38551 Nelumbo nucifera
Oeu020105.1 Olea europaea
Oeu022129.1 Olea europaea
Oeu030214.1 Olea europaea
Peaxi162Scf00922g00016 Petunia axillaris
PGR142G1942 Punica granatum
Phvul.001G044200 Phaseolus vulgaris
Phvul.001G044300 Phaseolus vulgaris
Phvul.001G044400 Phaseolus vulgaris
Phvul.009G084600 Phaseolus vulgaris
Potri.006G217900 Populus trichocarpa
Prupe.1G401300 Prunus persica
Psat5g033280 Pisum sativum
Psat6g023400 Pisum sativum
PSO223G0037 Papaver somniferum
PSO386G0069 Papaver somniferum
RcHm_v2.0_Chr6g0304741 Rosa chinensis
Rhsim04G0156600 Rhododendron simsii
SalBow8G0306 Salvia bowleyana
Sc10g0009530 Simmondsia chinensis
Sed0001538 Sechium edule
SEGI_40729 Sequoiadendron giganteum
SGA_v2.0_scaffold22G09922 Striga asiatica
SGA_v2.0_scaffold4G02181 Striga asiatica
Solyc08g067270.3 Solanum lycopersicum
Sopen08g021200 Solanum pennellii
Sp6g23210 Schrenkiella parvula
TAR624G0676 Trochodendron aralioides
THA.LOC104810950 Tarenaya hassleriana
Thecc.09G066400 Theobroma cacao
Thhalv10014216m.g Eutrema salsugineum
TPR.G21422 Trifolium pratense
TPR.G38861 Trifolium pratense
TWI32G0481 Tripterygium wilfordii
TWI34G0479 Tripterygium wilfordii
unitig_0.g2816 Utricularia gibba
unitig_32.g10930 Utricularia gibba
unitig_747.g21889 Utricularia gibba
vmacro08659 Vaccinium macrocarpon
VMungo0477G0001 Vigna mungo
VMungo1309G2063 Vigna mungo
Zm00001eb019450 Zea mays
Zm00001eb109280 Zea mays

User provided reference genes

Program Settings